Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0753

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
823,950	+		Psest_0752	0.52	-0.5
823,950	+		Psest_0752	0.52	-0.2
823,950	+		Psest_0752	0.52	-0.9
823,950	+		Psest_0752	0.52	+0.3
823,950	+		Psest_0752	0.52	+1.3
823,950	+		Psest_0752	0.52	+1.1
823,951	-		Psest_0752	0.52	+1.0
823,951	-		Psest_0752	0.52	+1.8
823,951	-		Psest_0752	0.52	+0.4
823,951	-		Psest_0752	0.52	-0.6
823,951	-		Psest_0752	0.52	+0.7
823,990	-		Psest_0752	0.56	+0.3
824,296	-		Psest_0752	0.87	-1.5
824,296	-		Psest_0752	0.87	-0.1
824,388	+				+2.4
824,388	+				-0.1
824,512	+				-1.9
824,512	+				-2.2
824,513	-				-0.3
824,513	-				+0.6
824,513	-				+1.7
824,513	-				-0.6
824,513	-				+0.4
824,513	-				-0.8
824,699	-				+0.3
824,710	+				-0.1
824,710	+				-1.6
824,710	+				-0.5
824,711	-				+1.9
824,711	-				-1.3
824,739	+				+0.7
824,740	-				+1.7
824,743	+				-1.8
824,744	-				+2.0
824,744	-				+1.4
824,822	+		Psest_0753	0.12	+0.8
824,822	+		Psest_0753	0.12	+0.4
824,822	+		Psest_0753	0.12	+1.1
824,822	+		Psest_0753	0.12	+0.5
824,823	-		Psest_0753	0.12	-0.1
824,823	-		Psest_0753	0.12	+0.5
824,826	-		Psest_0753	0.12	+1.1
824,826	-		Psest_0753	0.12	+0.1
824,894	+		Psest_0753	0.18	+0.2
824,894	+		Psest_0753	0.18	+0.7
824,895	-		Psest_0753	0.18	-1.5
825,182	+		Psest_0753	0.44	+0.7
825,182	+		Psest_0753	0.44	-1.7
825,183	-		Psest_0753	0.44	-1.3
825,302	+		Psest_0753	0.54	+2.5
825,334	+		Psest_0753	0.57	+0.1
825,334	+		Psest_0753	0.57	-1.2
825,434	+		Psest_0753	0.66	+0.0
825,434	+		Psest_0753	0.66	+0.6
825,470	+		Psest_0753	0.69	+1.5
825,470	+		Psest_0753	0.69	-0.9
825,470	+		Psest_0753	0.69	-0.1
825,470	+		Psest_0753	0.69	+1.0
825,470	+		Psest_0753	0.69	+0.2
825,471	-		Psest_0753	0.69	-0.2
825,471	-		Psest_0753	0.69	+1.5
825,471	-		Psest_0753	0.69	-1.9
825,471	-		Psest_0753	0.69	+1.2
825,512	+		Psest_0753	0.73	-0.6
825,516	+		Psest_0753	0.73	-0.3
825,516	+		Psest_0753	0.73	+0.7
825,516	+		Psest_0753	0.73	+1.6
825,517	-		Psest_0753	0.74	-2.2
825,517	-		Psest_0753	0.74	-2.0
825,608	+		Psest_0753	0.82	-1.1
825,608	+		Psest_0753	0.82	+0.4
825,608	+		Psest_0753	0.82	-0.2
825,609	-		Psest_0753	0.82	+1.3
825,609	-		Psest_0753	0.82	+1.7
825,620	+		Psest_0753	0.83	+0.0
825,620	+		Psest_0753	0.83	+1.7
825,620	+		Psest_0753	0.83	+1.9
825,621	-		Psest_0753	0.83	-0.5
825,621	-		Psest_0753	0.83	+0.7
825,621	-		Psest_0753	0.83	+1.1
825,621	-		Psest_0753	0.83	+0.9
825,621	-		Psest_0753	0.83	+0.3
825,736	+				-2.1
825,765	-				+0.5
825,785	+				-2.0
825,786	-				-1.6
825,786	-				-0.9
825,870	+				-1.5
825,902	+				-0.9
825,902	+				+1.1
825,910	+				+0.1
825,910	+				+0.7
825,910	+				+1.2
825,910	+				+2.0
825,910	+				+1.5
825,910	+				-0.6
825,910	+				-2.6
825,910	+				-2.1
825,910	+				+0.3
825,910	+				-0.2
825,911	-				-1.0
825,911	-				-1.6
825,911	-				-0.7
825,911	-				+2.5
826,086	+		Psest_0754	0.60	+0.3
826,086	+		Psest_0754	0.60	+1.7
826,146	+		Psest_0754	0.79	+1.2
826,146	+		Psest_0754	0.79	-0.6
826,146	+		Psest_0754	0.79	-2.3
826,146	+		Psest_0754	0.79	-2.6
826,147	-		Psest_0754	0.80	-0.0
826,147	-		Psest_0754	0.80	-0.5
826,147	-		Psest_0754	0.80	+0.4
826,147	-		Psest_0754	0.80	-0.3
826,147	-		Psest_0754	0.80	+0.6
826,149	+		Psest_0754	0.80	-0.6
826,149	+		Psest_0754	0.80	-0.6
826,149	+		Psest_0754	0.80	+1.0
826,149	+		Psest_0754	0.80	-0.1
826,149	+		Psest_0754	0.80	-0.3
826,149	+		Psest_0754	0.80	-0.6
826,149	+		Psest_0754	0.80	-1.3
826,150	-		Psest_0754	0.81	+1.4
826,150	-		Psest_0754	0.81	+1.4
826,150	-		Psest_0754	0.81	+1.6
826,150	-		Psest_0754	0.81	-0.6
826,150	-		Psest_0754	0.81	+1.0
826,150	-		Psest_0754	0.81	+1.6
826,150	-		Psest_0754	0.81	+0.4
826,150	-		Psest_0754	0.81	-0.3
826,493	+		Psest_0755	0.24	-1.3
826,493	+		Psest_0755	0.24	-0.5
826,493	+		Psest_0755	0.24	-0.1
826,493	+		Psest_0755	0.24	+0.1
826,494	-		Psest_0755	0.24	+1.7
826,494	-		Psest_0755	0.24	-0.4
826,494	-		Psest_0755	0.24	+1.1
826,494	-		Psest_0755	0.24	+0.4
826,494	-		Psest_0755	0.24	-1.1
826,494	-		Psest_0755	0.24	+0.8
826,494	-		Psest_0755	0.24	+0.8
826,494	-		Psest_0755	0.24	-0.1
826,494	-		Psest_0755	0.24	-0.3
826,598	+		Psest_0755	0.37	-0.4
826,598	+		Psest_0755	0.37	+0.2
826,598	+		Psest_0755	0.37	-0.9
826,599	-		Psest_0755	0.37	-1.3
826,599	-		Psest_0755	0.37	+0.6
826,744	+		Psest_0755	0.56	-0.7
826,745	-		Psest_0755	0.56	-1.3
826,745	-		Psest_0755	0.56	+0.1
826,745	-		Psest_0755	0.56	+0.7