Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4248

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
4,431,974	+				-0.4
4,431,975	-				+0.0
4,431,975	-				+2.6
4,431,975	-				+2.9
4,431,975	-				-0.4
4,431,975	-				-0.5
4,431,975	-				-0.4
4,431,975	-				-0.4
4,432,239	-		Psest_4247	0.25	+0.6
4,432,429	+		Psest_4247	0.51	-0.0
4,432,430	-		Psest_4247	0.51	+0.3
4,432,430	-		Psest_4247	0.51	+1.9
4,432,453	+		Psest_4247	0.55	+0.0
4,432,649	-		Psest_4247	0.81	+0.0
4,432,649	-		Psest_4247	0.81	+0.9
4,432,812	+				-1.3
4,432,812	+				-0.6
4,432,812	+				+2.1
4,432,812	+				+0.7
4,432,813	-				+0.6
4,432,813	-				+0.4
4,432,888	+		Psest_4248	0.11	-0.8
4,432,995	+		Psest_4248	0.22	-1.8
4,432,995	+		Psest_4248	0.22	+0.7
4,432,996	-		Psest_4248	0.22	+0.2
4,432,996	-		Psest_4248	0.22	-0.2
4,432,996	-		Psest_4248	0.22	+2.0
4,432,996	-		Psest_4248	0.22	-2.3
4,433,059	-		Psest_4248	0.28	+2.6
4,433,059	-		Psest_4248	0.28	-1.1
4,433,068	-		Psest_4248	0.29	+0.2
4,433,113	-		Psest_4248	0.34	+1.6
4,433,113	-		Psest_4248	0.34	-0.7
4,433,113	-		Psest_4248	0.34	+2.0
4,433,113	-		Psest_4248	0.34	-1.8
4,433,113	-		Psest_4248	0.34	+0.3
4,433,206	+		Psest_4248	0.44	+1.3
4,433,207	-		Psest_4248	0.44	+0.0
4,433,268	+		Psest_4248	0.50	+2.4
4,433,268	+		Psest_4248	0.50	-1.0
4,433,268	+		Psest_4248	0.50	-0.5
4,433,268	+		Psest_4248	0.50	+1.2
4,433,268	+		Psest_4248	0.50	+0.4
4,433,269	-		Psest_4248	0.50	+0.3
4,433,269	-		Psest_4248	0.50	+1.9
4,433,287	+		Psest_4248	0.52	+1.2
4,433,288	-		Psest_4248	0.52	+1.6
4,433,288	-		Psest_4248	0.52	-1.7
4,433,437	-		Psest_4248	0.67	+2.6
4,433,490	+		Psest_4248	0.73	+0.1
4,433,490	+		Psest_4248	0.73	+0.4
4,433,490	+		Psest_4248	0.73	+0.6
4,433,490	+		Psest_4248	0.73	-0.7
4,433,491	-		Psest_4248	0.73	-1.2
4,433,491	-		Psest_4248	0.73	-0.8
4,433,491	-		Psest_4248	0.73	+1.2
4,433,491	-		Psest_4248	0.73	+1.7
4,433,511	+		Psest_4248	0.75	-1.2
4,433,512	-		Psest_4248	0.75	+2.9
4,433,512	-		Psest_4248	0.75	+2.5
4,433,512	-		Psest_4248	0.75	+1.3
4,433,512	-		Psest_4248	0.75	+0.2
4,433,942	-				+0.0
4,433,942	-				+1.9
4,433,982	+		Psest_4249	0.10	-1.6
4,433,982	+		Psest_4249	0.10	-2.5
4,433,982	+		Psest_4249	0.10	-1.4
4,433,982	+		Psest_4249	0.10	-2.0
4,433,982	+		Psest_4249	0.10	+1.5
4,433,982	+		Psest_4249	0.10	+0.5
4,433,983	-		Psest_4249	0.10	+1.0
4,433,983	-		Psest_4249	0.10	-0.7
4,433,983	-		Psest_4249	0.10	+0.6
4,433,983	-		Psest_4249	0.10	+0.3
4,433,983	-		Psest_4249	0.10	+1.6
4,434,096	+		Psest_4249	0.16	-0.7
4,434,097	-		Psest_4249	0.16	+0.6
4,434,210	-		Psest_4249	0.21	-2.0
4,434,222	-		Psest_4249	0.22	+0.8
4,434,271	+		Psest_4249	0.24	+0.0
4,434,271	+		Psest_4249	0.24	+0.6
4,434,272	-		Psest_4249	0.24	+0.9
4,434,278	+		Psest_4249	0.25	-0.9
4,434,461	+		Psest_4249	0.34	-0.7
4,434,462	-		Psest_4249	0.34	+0.0
4,434,552	-		Psest_4249	0.38	-2.1