Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3464

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
3,633,302	+				-0.6
3,633,393	+				+0.7
3,633,394	-				-0.6
3,633,558	+		Psest_3463	0.28	-1.1
3,633,558	+		Psest_3463	0.28	-0.2
3,633,558	+		Psest_3463	0.28	+1.7
3,633,558	+		Psest_3463	0.28	-2.5
3,633,558	+		Psest_3463	0.28	-0.9
3,633,558	+		Psest_3463	0.28	-2.3
3,633,558	+		Psest_3463	0.28	-1.5
3,633,558	+		Psest_3463	0.28	-1.3
3,633,558	+		Psest_3463	0.28	-0.6
3,633,558	+		Psest_3463	0.28	-0.3
3,633,558	+		Psest_3463	0.28	-0.6
3,633,559	-		Psest_3463	0.28	+0.7
3,633,559	-		Psest_3463	0.28	-1.7
3,633,559	-		Psest_3463	0.28	+0.1
3,633,559	-		Psest_3463	0.28	+0.1
3,633,559	-		Psest_3463	0.28	-0.3
3,633,559	-		Psest_3463	0.28	-1.9
3,633,559	-		Psest_3463	0.28	+0.3
3,633,559	-		Psest_3463	0.28	-0.3
3,633,559	-		Psest_3463	0.28	-1.4
3,633,559	-		Psest_3463	0.28	-0.4
3,633,559	-		Psest_3463	0.28	-0.3
3,633,982	-				-0.1
3,633,982	-				-0.9
3,633,988	-				-2.1
3,634,005	+				-1.4
3,634,005	+				+0.2
3,634,005	+				-1.3
3,634,006	-				+0.9
3,634,006	-				-1.3
3,634,006	-				-0.1
3,634,006	-				-1.1
3,634,006	-				-1.2
3,634,006	-				-1.2
3,634,222	+				+0.8
3,634,223	-				+1.7
3,634,223	-				+2.9
3,634,223	-				+2.0
3,634,223	-				+2.7
3,634,223	-				+2.7
3,634,392	+		Psest_3464	0.21	+4.5
3,634,392	+		Psest_3464	0.21	+4.6
3,634,392	+		Psest_3464	0.21	+5.2
3,634,392	+		Psest_3464	0.21	+3.8
3,634,392	+		Psest_3464	0.21	+2.1
3,634,392	+		Psest_3464	0.21	+5.0
3,634,392	+		Psest_3464	0.21	+4.8
3,634,393	-		Psest_3464	0.21	+3.3
3,634,393	-		Psest_3464	0.21	+4.1
3,634,449	+		Psest_3464	0.25	+1.9
3,634,449	+		Psest_3464	0.25	+0.1
3,634,449	+		Psest_3464	0.25	+0.7
3,634,449	+		Psest_3464	0.25	+3.9
3,634,449	+		Psest_3464	0.25	+0.8
3,634,450	-		Psest_3464	0.25	+1.1
3,634,450	-		Psest_3464	0.25	+2.0
3,634,450	-		Psest_3464	0.25	+1.7
3,634,450	-		Psest_3464	0.25	+0.1
3,634,450	-		Psest_3464	0.25	-1.5
3,634,450	-		Psest_3464	0.25	-0.6
3,634,541	+		Psest_3464	0.32	+6.1
3,634,542	-		Psest_3464	0.32	+4.9
3,634,904	+		Psest_3464	0.61	+6.3
3,634,904	+		Psest_3464	0.61	+6.3
3,634,904	+		Psest_3464	0.61	+5.1
3,634,904	+		Psest_3464	0.61	+6.4
3,634,905	-		Psest_3464	0.61	+8.3
3,634,905	-		Psest_3464	0.61	+8.0
3,634,905	-		Psest_3464	0.61	+6.5
3,634,905	-		Psest_3464	0.61	+7.7
3,634,905	-		Psest_3464	0.61	+7.1
3,635,064	+		Psest_3464	0.73	+6.2
3,635,064	+		Psest_3464	0.73	+6.0
3,635,065	-		Psest_3464	0.73	+7.7
3,635,065	-		Psest_3464	0.73	+7.4
3,635,091	+		Psest_3464	0.75	+5.3
3,635,092	-		Psest_3464	0.75	+8.0
3,635,097	+		Psest_3464	0.76	+5.8
3,635,097	+		Psest_3464	0.76	+6.6
3,635,097	+		Psest_3464	0.76	+4.6
3,635,097	+		Psest_3464	0.76	+6.3
3,635,098	-		Psest_3464	0.76	+7.9
3,635,098	-		Psest_3464	0.76	+6.2
3,635,098	-		Psest_3464	0.76	+8.2
3,635,098	-		Psest_3464	0.76	+7.2
3,635,098	-		Psest_3464	0.76	+7.9
3,635,098	-		Psest_3464	0.76	+7.7
3,635,100	+		Psest_3464	0.76	+6.0
3,635,100	+		Psest_3464	0.76	+5.1
3,635,100	+		Psest_3464	0.76	+5.9
3,635,100	+		Psest_3464	0.76	+5.4
3,635,101	-		Psest_3464	0.76	+7.3
3,635,677	+		Psest_3465	0.41	-0.9
3,635,678	-		Psest_3465	0.41	-0.6
3,635,730	+		Psest_3465	0.49	-0.1
3,635,730	+		Psest_3465	0.49	+1.7
3,635,730	+		Psest_3465	0.49	-0.5
3,635,730	+		Psest_3465	0.49	-0.7
3,635,731	-				+2.3
3,635,731	-		Psest_3465	0.49	+1.2
3,635,731	-		Psest_3465	0.49	+1.3
3,635,731	-		Psest_3465	0.49	-0.4
3,635,731	-		Psest_3465	0.49	-1.1
3,635,731	-		Psest_3465	0.49	-1.8
3,635,731	-		Psest_3465	0.49	+0.7
3,635,785	+		Psest_3465	0.57	-0.4
3,635,785	+		Psest_3465	0.57	-0.4
3,635,786	-		Psest_3465	0.57	-0.6
3,635,947	+		Psest_3465	0.80	+1.7
3,635,948	-		Psest_3465	0.81	+0.1
3,636,007	+		Psest_3465	0.89	-1.2
3,636,008	-		Psest_3465	0.89	+0.1
3,636,025	+				-1.1
3,636,185	+				+2.3
3,636,186	-				-2.2
3,636,351	+				+0.0
3,636,351	+				-0.6
3,636,351	+				+0.0
3,636,351	+				+0.5
3,636,351	+				-0.9
3,636,352	-				-0.3
3,636,352	-				-0.1
3,636,352	-				+0.2
3,636,352	-				-0.6
3,636,352	-				-0.3
3,636,352	-				-0.8
3,636,396	+		Psest_3466	0.11	-1.5
3,636,396	+		Psest_3466	0.11	+1.6