Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3316

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
3,478,233	+				-1.4
3,478,266	+				+2.4
3,478,272	+				+0.2
3,478,307	+		Psest_3314	0.11	+0.3
3,478,307	+		Psest_3314	0.11	+0.9
3,478,307	+		Psest_3314	0.11	-1.7
3,478,327	+		Psest_3314	0.17	-1.1
3,478,483	+		Psest_3314	0.68	-0.5
3,478,483	+		Psest_3314	0.68	+0.9
3,478,483	+		Psest_3314	0.68	+0.1
3,478,483	+		Psest_3314	0.68	-2.3
3,478,483	+		Psest_3314	0.68	-2.0
3,478,483	+		Psest_3314	0.68	+1.4
3,478,483	+		Psest_3314	0.68	+0.4
3,478,483	+		Psest_3314	0.68	+1.8
3,478,483	+		Psest_3314	0.68	-0.1
3,478,483	+		Psest_3314	0.68	-1.2
3,478,483	+		Psest_3314	0.68	+1.9
3,478,483	+		Psest_3314	0.68	+0.9
3,478,483	+		Psest_3314	0.68	-0.3
3,478,483	+		Psest_3314	0.68	+0.7
3,478,483	+		Psest_3314	0.68	+1.8
3,478,483	+		Psest_3314	0.68	+0.5
3,478,483	+		Psest_3314	0.68	+1.9
3,478,483	+		Psest_3314	0.68	-1.5
3,478,483	+		Psest_3314	0.68	+0.3
3,478,483	+		Psest_3314	0.68	-1.1
3,478,483	+		Psest_3314	0.68	+1.8
3,478,550	+		Psest_3314	0.90	+0.8
3,478,550	+		Psest_3314	0.90	+0.8
3,479,085	+				-2.0
3,479,085	+				-2.7
3,479,085	+				-0.6
3,479,085	+				-1.2
3,479,085	+				-2.1
3,479,085	+				-1.7
3,479,086	-				-3.7
3,479,086	-				-2.4
3,479,086	-				-3.1
3,479,086	-				-3.2
3,479,086	-				-3.3
3,479,127	+				-0.5
3,479,128	-				-3.2
3,479,128	-				-2.7
3,479,147	+				-0.3
3,479,147	+				-2.8
3,479,210	-		Psest_3316	0.16	-1.9
3,479,217	+		Psest_3316	0.17	-3.3
3,479,218	-		Psest_3316	0.17	-2.3
3,479,314	+		Psest_3316	0.29	-1.8
3,479,334	-		Psest_3316	0.31	-3.8
3,479,499	+		Psest_3316	0.50	-1.4
3,479,499	+		Psest_3316	0.50	-1.2
3,479,499	+		Psest_3316	0.50	-1.5
3,479,500	-		Psest_3316	0.50	-2.4
3,479,500	-		Psest_3316	0.50	-1.2
3,479,500	-		Psest_3316	0.50	-1.4
3,479,500	-		Psest_3316	0.50	-3.3
3,479,500	-		Psest_3316	0.50	-3.1
3,479,500	-		Psest_3316	0.50	-2.3
3,479,623	-		Psest_3316	0.65	-2.1
3,479,706	-		Psest_3316	0.74	-2.0
3,479,706	-		Psest_3316	0.74	-3.1
3,479,757	-		Psest_3316	0.80	-2.1
3,479,801	+		Psest_3316	0.85	-0.8
3,479,801	+		Psest_3316	0.85	-2.3
3,479,801	+		Psest_3316	0.85	-1.0
3,479,801	+		Psest_3316	0.85	-1.6
3,479,801	+		Psest_3316	0.85	-3.3
3,479,801	+		Psest_3316	0.85	-0.4
3,479,801	+		Psest_3316	0.85	-0.4
3,479,802	-		Psest_3316	0.85	-1.7
3,479,802	-		Psest_3316	0.85	-1.4
3,479,802	-		Psest_3316	0.85	-1.3
3,479,849	+				-0.9
3,479,849	+				-0.3
3,479,849	+				-2.0
3,479,850	-				-2.8
3,479,924	+				-1.4
3,479,931	-				-1.5
3,479,931	-				-2.3
3,479,931	-				+0.9
3,479,931	-				-0.6
3,479,931	-				-1.8
3,479,931	-				-0.8
3,479,931	-				-1.3
3,479,936	+				-0.1
3,479,957	+				-1.3
3,479,957	+				-1.6
3,479,957	+				-1.1
3,479,957	+				-3.9
3,479,957	+				-2.3
3,479,957	+				-1.0
3,479,957	+				-1.0
3,479,957	+				-0.9
3,479,958	-				-1.7
3,480,117	+		Psest_3317	0.64	-1.8
3,480,117	+		Psest_3317	0.64	+0.5
3,480,117	+		Psest_3317	0.64	-1.4
3,480,117	+		Psest_3317	0.64	-1.8
3,480,117	+		Psest_3317	0.64	-1.2
3,480,117	+		Psest_3317	0.64	-1.2
3,480,117	+		Psest_3317	0.64	-4.3
3,480,118	-		Psest_3317	0.65	+0.6
3,480,194	-				-1.5
3,480,194	-				+0.5
3,480,392	+				-0.3
3,480,392	+				-0.2
3,480,470	+		Psest_3318	0.15	-0.1
3,480,470	+		Psest_3318	0.15	-2.7
3,480,471	-		Psest_3318	0.15	+0.7
3,480,471	-		Psest_3318	0.15	-1.0
3,480,471	-		Psest_3318	0.15	+0.5
3,480,625	-		Psest_3318	0.27	-2.3
3,480,639	+		Psest_3318	0.28	+0.1
3,480,639	+		Psest_3318	0.28	+1.2
3,480,639	+		Psest_3318	0.28	+0.2
3,480,639	+		Psest_3318	0.28	+0.8
3,480,639	+		Psest_3318	0.28	-0.4
3,480,639	+		Psest_3318	0.28	-1.2
3,480,639	+		Psest_3318	0.28	-0.4
3,480,640	-		Psest_3318	0.28	+0.5
3,480,640	-		Psest_3318	0.28	+0.7
3,480,640	-		Psest_3318	0.28	+0.5
3,480,640	-		Psest_3318	0.28	-1.4
3,480,640	-		Psest_3318	0.28	-0.5
3,480,640	-		Psest_3318	0.28	+0.8
3,480,640	-		Psest_3318	0.28	+1.2
3,480,640	-		Psest_3318	0.28	+0.5
3,480,640	-		Psest_3318	0.28	-0.7
3,480,640	-		Psest_3318	0.28	+1.1
3,480,640	-		Psest_3318	0.28	-2.5
3,480,679	-		Psest_3318	0.31	+1.1
3,480,702	+		Psest_3318	0.32	-1.0
3,480,703	-		Psest_3318	0.32	+0.1
3,480,703	-		Psest_3318	0.32	-1.4
3,480,795	+		Psest_3318	0.39	-1.1
3,480,796	-		Psest_3318	0.39	+1.3
3,480,796	-		Psest_3318	0.39	+0.1
3,480,796	-		Psest_3318	0.39	+0.4
3,480,796	-		Psest_3318	0.39	+0.0
3,480,796	-		Psest_3318	0.39	-0.0