Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3109

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
3,285,779	-		Psest_3108	0.36	-0.7
3,285,779	-		Psest_3108	0.36	+0.5
3,285,808	+		Psest_3108	0.39	+0.5
3,285,808	+		Psest_3108	0.39	+0.1
3,285,808	+		Psest_3108	0.39	+0.6
3,285,809	-		Psest_3108	0.39	+0.2
3,285,809	-		Psest_3108	0.39	+0.6
3,285,814	+		Psest_3108	0.39	+1.2
3,285,814	+		Psest_3108	0.39	+0.3
3,285,814	+		Psest_3108	0.39	+0.6
3,285,814	+		Psest_3108	0.39	-1.4
3,285,814	+		Psest_3108	0.39	-1.5
3,285,829	+		Psest_3108	0.40	+0.8
3,285,830	-		Psest_3108	0.41	+0.5
3,285,843	+		Psest_3108	0.42	-1.3
3,285,940	+		Psest_3108	0.49	+0.6
3,285,941	-		Psest_3108	0.49	+0.1
3,285,984	-		Psest_3108	0.53	-0.3
3,286,116	+		Psest_3108	0.64	+1.1
3,286,220	-		Psest_3108	0.72	-0.5
3,286,255	+		Psest_3108	0.75	-1.0
3,286,268	-		Psest_3108	0.76	-1.0
3,286,345	+		Psest_3108	0.82	+0.6
3,286,345	+		Psest_3108	0.82	-0.2
3,286,345	+		Psest_3108	0.82	+2.2
3,286,345	+		Psest_3108	0.82	-0.6
3,286,345	+		Psest_3108	0.82	-1.8
3,286,345	+		Psest_3108	0.82	+0.4
3,286,345	+		Psest_3108	0.82	-1.0
3,286,346	-		Psest_3108	0.82	+1.9
3,286,346	-		Psest_3108	0.82	-0.6
3,286,346	-		Psest_3108	0.82	+0.2
3,286,346	-		Psest_3108	0.82	-1.5
3,286,346	-		Psest_3108	0.82	+0.4
3,286,346	-		Psest_3108	0.82	+1.3
3,286,346	-		Psest_3108	0.82	-0.5
3,286,346	-		Psest_3108	0.82	+1.0
3,286,347	+		Psest_3108	0.82	-1.7
3,286,347	+		Psest_3108	0.82	+0.2
3,286,347	+		Psest_3108	0.82	+0.2
3,286,347	+		Psest_3108	0.82	-1.2
3,286,347	+		Psest_3108	0.82	-2.4
3,286,348	-		Psest_3108	0.82	-2.5
3,286,348	-		Psest_3108	0.82	+0.0
3,286,465	+				+1.7
3,286,465	+				+0.4
3,286,466	-				+0.2
3,286,557	+				+0.0
3,286,557	+				+1.0
3,286,562	+				+0.2
3,286,562	+				+1.5
3,286,562	+				-1.0
3,286,562	+				+0.1
3,286,563	-				+0.6
3,286,563	-				+0.2
3,286,563	-				+0.6
3,286,563	-				-1.7
3,286,563	-				+1.4
3,286,563	-				+3.2
3,286,563	-				-1.2
3,286,563	-				+0.6
3,286,563	-				-0.4
3,286,563	-				-0.0
3,286,563	-				-0.0
3,286,739	+				-0.4
3,286,740	-				+0.2
3,286,740	-				-1.5
3,286,906	-		Psest_3109	0.22	+1.1
3,286,906	-		Psest_3109	0.22	+0.0
3,286,909	+		Psest_3109	0.22	+0.2
3,286,909	+		Psest_3109	0.22	-0.0
3,286,909	+		Psest_3109	0.22	+0.0
3,286,909	+		Psest_3109	0.22	-1.0
3,286,909	+		Psest_3109	0.22	+2.6
3,286,909	+		Psest_3109	0.22	-2.1
3,286,909	+		Psest_3109	0.22	+3.5
3,286,909	+		Psest_3109	0.22	-0.6
3,286,909	+		Psest_3109	0.22	-1.1
3,286,909	+		Psest_3109	0.22	-1.8
3,286,909	+		Psest_3109	0.22	-2.1
3,286,909	+		Psest_3109	0.22	+0.4
3,286,909	+		Psest_3109	0.22	+1.4
3,286,909	+		Psest_3109	0.22	+1.2
3,286,909	+		Psest_3109	0.22	+0.8
3,286,909	+		Psest_3109	0.22	+1.7
3,286,909	+		Psest_3109	0.22	+1.7
3,286,910	-		Psest_3109	0.22	+0.9
3,286,910	-		Psest_3109	0.22	+0.8
3,286,910	-		Psest_3109	0.22	-0.8
3,286,910	-		Psest_3109	0.22	+1.4
3,286,910	-		Psest_3109	0.22	-1.5
3,286,910	-		Psest_3109	0.22	+0.8
3,286,910	-		Psest_3109	0.22	+1.1
3,286,910	-		Psest_3109	0.22	-1.6
3,286,910	-		Psest_3109	0.22	-0.5
3,286,910	-		Psest_3109	0.22	+2.0
3,286,910	-		Psest_3109	0.22	-1.7
3,286,910	-		Psest_3109	0.22	+0.3
3,286,910	-		Psest_3109	0.22	-1.3
3,286,910	-		Psest_3109	0.22	+1.6
3,286,910	-		Psest_3109	0.22	+0.1
3,286,910	-		Psest_3109	0.22	+0.4
3,286,910	-		Psest_3109	0.22	+0.4
3,286,910	-		Psest_3109	0.22	+0.7
3,286,910	-		Psest_3109	0.22	+0.1
3,286,910	-		Psest_3109	0.22	-1.4
3,287,297	+		Psest_3109	0.70	-1.0
3,287,297	+		Psest_3109	0.70	-0.1
3,287,297	+		Psest_3109	0.70	+0.8
3,287,298	-		Psest_3109	0.70	+2.5
3,287,340	-		Psest_3109	0.75	+0.3
3,287,431	-		Psest_3109	0.86	+0.4
3,287,551	-				-0.3
3,287,624	+				-1.4
3,287,624	+				+0.8
3,287,624	+				+1.4
3,287,624	+				-1.3
3,287,624	+				+1.2
3,287,624	+				+0.1
3,287,624	+				-2.0
3,287,624	+				-1.4
3,287,624	+				+0.7
3,287,624	+				-1.5
3,287,625	-				-0.7
3,287,625	-				+0.7
3,287,625	-				+0.4
3,287,625	-				-1.5
3,287,625	-				+0.1
3,287,625	-				-0.4
3,287,625	-				+2.4
3,287,625	-				+1.1
3,287,625	-				-2.5
3,287,625	-				-1.7
3,287,625	-				-1.0
3,287,625	-				+0.1
3,287,625	-				+0.4
3,287,625	-				-0.1
3,287,938	+		Psest_3110	0.31	+1.6
3,287,938	+		Psest_3110	0.31	-2.8
3,287,939	-		Psest_3110	0.31	+0.2
3,287,939	-		Psest_3110	0.31	-0.2
3,287,939	-		Psest_3110	0.31	+0.5
3,287,939	-		Psest_3110	0.31	+0.3
3,288,223	+		Psest_3110	0.57	-0.2
3,288,321	-		Psest_3110	0.66	-0.1
3,288,321	-		Psest_3110	0.66	+1.0
3,288,321	-		Psest_3110	0.66	-1.6
3,288,514	+		Psest_3110	0.83	+0.0