Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2724

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
2,911,109	-				-1.8
2,911,312	+				-0.3
2,911,494	+				+0.2
2,911,548	+				+1.7
2,911,571	+				-2.5
2,911,571	+				-0.6
2,911,571	+				+0.9
2,911,571	+				-0.7
2,911,571	+				-1.6
2,911,571	+				+0.6
2,911,607	+				+1.4
2,911,659	+				-1.4
2,911,660	-				-1.0
2,911,660	-				+0.1
2,911,698	+		Psest_2723	0.12	-1.4
2,911,840	-		Psest_2723	0.45	-0.4
2,911,855	+		Psest_2723	0.49	-1.1
2,911,856	-		Psest_2723	0.49	+0.1
2,911,969	+		Psest_2723	0.76	+1.3
2,911,969	+		Psest_2723	0.76	-0.0
2,911,969	+		Psest_2723	0.76	-1.1
2,911,970	-		Psest_2723	0.76	+1.3
2,911,970	-		Psest_2723	0.76	-1.0
2,911,970	-		Psest_2723	0.76	+0.4
2,912,108	+				-1.8
2,912,272	-		Psest_2724	0.32	-2.1
2,912,272	-		Psest_2724	0.32	-1.6
2,912,473	-		Psest_2724	0.71	-1.6
2,912,544	+		Psest_2724	0.85	-0.8
2,912,594	-				+2.6
2,912,641	-				+0.9
2,912,692	+				+2.3
2,912,719	+				-0.5
2,912,719	+				+0.4
2,912,720	-				+1.2
2,912,722	-				-0.4
2,912,741	-				-1.4
2,912,766	-				-0.6
2,912,786	-				+0.7
2,912,833	+				-0.4
2,912,833	+				+1.4
2,912,833	+				-0.9
2,912,834	-				-0.6
2,912,834	-				-0.1
2,912,930	+		Psest_2725	0.86	+1.8
2,912,930	+		Psest_2725	0.86	-0.5
2,912,931	-		Psest_2725	0.88	-0.0
2,912,931	-		Psest_2725	0.88	+2.0
2,912,933	-				+0.7
2,912,933	-				-0.2
2,913,004	-				-1.4
2,913,129	+		Psest_2726	0.42	-1.3
2,913,129	+		Psest_2726	0.42	-0.0
2,913,215	+		Psest_2726	0.66	-0.2
2,913,395	+				+0.2
2,913,395	+				+0.9
2,913,395	+				-0.5
2,913,395	+				-1.6
2,913,395	+				-0.4
2,913,395	+				-0.6
2,913,395	+				+0.1
2,913,396	-				-0.3
2,913,396	-				-1.4
2,913,396	-				+1.6
2,913,396	-				+0.5
2,913,396	-				-0.1
2,913,396	-				-0.7
2,913,396	-				-0.3
2,913,461	-				-2.3
2,913,461	-				-0.1