Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2605

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
2,786,910	+				-0.3
2,786,910	+				-1.4
2,786,910	+				+2.7
2,786,911	-				-0.2
2,786,911	-				-0.6
2,786,911	-				-2.9
2,786,911	-				+0.1
2,786,911	-				+1.0
2,786,911	-				-1.7
2,786,911	-				+0.1
2,786,911	-				-2.2
2,786,916	+				-0.6
2,786,917	-				-0.2
2,786,917	-				-0.1
2,786,917	-				+0.6
2,786,917	-				+2.9
2,786,917	-				+0.2
2,786,917	-				+0.2
2,786,917	-				-0.1
2,786,917	-				+2.8
2,786,917	-				-0.5
2,786,917	-				-4.3
2,786,917	-				+1.2
2,786,917	-				-2.9
2,786,917	-				-0.1
2,786,917	-				+0.1
2,786,992	+				+0.9
2,786,993	-				-1.6
2,786,996	+				+0.3
2,786,996	+				+1.1
2,786,996	+				-2.2
2,786,996	+				-1.1
2,786,996	+				-0.7
2,786,996	+				-0.1
2,786,997	-				-0.4
2,786,997	-				-0.9
2,786,997	-				-1.5
2,786,997	-				-0.1
2,786,997	-				-0.2
2,786,997	-				+0.2
2,786,997	-				+0.9
2,787,005	-				-0.5
2,787,005	-				-1.2
2,787,013	+				+0.4
2,787,067	+		Psest_2604	0.14	-0.4
2,787,067	+		Psest_2604	0.14	-1.5
2,787,068	-		Psest_2604	0.14	-0.8
2,787,068	-		Psest_2604	0.14	+0.4
2,787,068	-		Psest_2604	0.14	-0.2
2,787,068	-		Psest_2604	0.14	+0.7
2,787,068	-		Psest_2604	0.14	-0.3
2,787,068	-		Psest_2604	0.14	+0.3
2,787,239	-		Psest_2604	0.37	-0.4
2,787,239	-		Psest_2604	0.37	+0.0
2,787,352	+		Psest_2604	0.52	+1.5
2,787,438	-		Psest_2604	0.64	-0.8
2,787,464	-		Psest_2604	0.67	-1.9
2,787,464	-		Psest_2604	0.67	-2.2
2,787,464	-		Psest_2604	0.67	-1.5
2,787,464	-		Psest_2604	0.67	+0.2
2,787,494	-		Psest_2604	0.72	-0.1
2,787,559	+		Psest_2604	0.80	-1.6
2,787,559	+		Psest_2604	0.80	+0.6
2,787,560	-		Psest_2604	0.80	-0.5
2,787,560	-		Psest_2604	0.80	+0.1
2,787,560	-		Psest_2604	0.80	-0.6
2,787,771	+				-3.4
2,787,771	+				-0.3
2,787,772	-				-0.2
2,787,772	-				-0.4
2,787,772	-				+2.0
2,787,772	-				-1.1
2,787,772	-				+0.5
2,787,772	-				-3.6
2,787,791	-				-0.1
2,787,937	+		Psest_2605	0.34	-0.6
2,787,977	-		Psest_2605	0.42	-2.5
2,788,253	-				+0.3
2,788,345	+				-0.6
2,788,346	-				+1.7
2,788,363	-				+0.8
2,788,363	-				-1.6
2,788,539	+		Psest_2606	0.16	+1.0
2,788,540	-		Psest_2606	0.16	+0.8
2,788,540	-		Psest_2606	0.16	+0.1
2,788,540	-		Psest_2606	0.16	-1.4
2,788,621	+		Psest_2606	0.22	+0.1
2,788,621	+		Psest_2606	0.22	+0.1
2,788,621	+		Psest_2606	0.22	-3.1
2,788,622	-		Psest_2606	0.22	-0.4
2,788,622	-		Psest_2606	0.22	-0.1
2,788,622	-		Psest_2606	0.22	-2.0
2,788,622	-		Psest_2606	0.22	-1.1
2,788,622	-		Psest_2606	0.22	+1.1
2,788,622	-		Psest_2606	0.22	-1.3
2,788,632	-		Psest_2606	0.23	-0.8
2,788,721	-		Psest_2606	0.29	+1.0
2,788,735	+		Psest_2606	0.31	+0.3
2,788,735	+		Psest_2606	0.31	+0.8
2,788,749	+		Psest_2606	0.32	-1.9
2,788,915	-		Psest_2606	0.44	-0.4
2,788,915	-		Psest_2606	0.44	-1.7
2,788,915	-		Psest_2606	0.44	+1.0
2,789,019	+		Psest_2606	0.52	+0.5
2,789,020	-		Psest_2606	0.52	-1.2
2,789,127	+		Psest_2606	0.60	-1.2
2,789,127	+		Psest_2606	0.60	-0.7
2,789,128	-		Psest_2606	0.60	-1.4
2,789,128	-		Psest_2606	0.60	+0.0