Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2599

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
2,779,386	+				-2.8
2,779,387	-				-1.2
2,779,425	-				+0.1
2,779,448	+				+1.2
2,779,449	-				+0.9
2,779,449	-				+0.3
2,779,476	+				-0.8
2,779,518	-				+0.3
2,779,522	-				+1.1
2,779,533	+				+0.8
2,779,597	-				+0.5
2,779,687	-				+0.5
2,779,705	+				-1.2
2,779,706	-				+0.3
2,779,781	-				-0.2
2,779,822	-				-0.8
2,779,846	-				+0.7
2,779,846	-				+0.1
2,779,912	+				-1.9
2,779,927	-				-0.8
2,779,931	+				-0.1
2,779,931	+				-2.5
2,779,932	-				+0.6
2,779,932	-				+0.2
2,779,998	+				-1.9
2,780,007	-				-0.0
2,780,010	-				+0.3
2,780,062	-				+0.6
2,780,151	+				-2.0
2,780,152	-				+0.3
2,780,215	+				+2.6
2,780,216	-				+0.8
2,780,249	+		Psest_2599	0.12	+0.5
2,780,317	+		Psest_2599	0.21	-2.2
2,780,317	+		Psest_2599	0.21	-1.1
2,780,317	+		Psest_2599	0.21	-2.8
2,780,411	-		Psest_2599	0.33	-0.3
2,780,452	+		Psest_2599	0.38	-0.9
2,780,452	+		Psest_2599	0.38	-1.9
2,780,452	+		Psest_2599	0.38	+0.1
2,780,452	+		Psest_2599	0.38	-1.1
2,780,459	+		Psest_2599	0.39	-2.4
2,780,460	-		Psest_2599	0.39	+0.1
2,780,513	-		Psest_2599	0.46	-0.6
2,780,618	-		Psest_2599	0.60	-0.1
2,780,618	-		Psest_2599	0.60	+1.0
2,780,618	-		Psest_2599	0.60	-0.8
2,780,618	-		Psest_2599	0.60	-0.8
2,780,618	-		Psest_2599	0.60	+0.5
2,780,618	-		Psest_2599	0.60	-0.0
2,781,053	+				-0.2
2,781,053	+				-0.0
2,781,053	+				-0.7
2,781,054	-				-0.3
2,781,054	-				-0.7
2,781,054	-				-0.4
2,781,054	-				-0.8
2,781,068	+				+0.2
2,781,069	-				-0.1
2,781,134	+		Psest_2600	0.11	+0.9
2,781,135	-		Psest_2600	0.11	-1.3
2,781,135	-		Psest_2600	0.11	+0.1
2,781,347	-		Psest_2600	0.29	-2.3
2,781,452	+		Psest_2600	0.38	-0.1
2,781,452	+		Psest_2600	0.38	+1.2
2,781,452	+		Psest_2600	0.38	-0.8
2,781,453	-		Psest_2600	0.38	-0.7
2,781,453	-		Psest_2600	0.38	-0.5
2,781,453	-		Psest_2600	0.38	-2.0
2,781,453	-		Psest_2600	0.38	-0.0
2,781,708	+		Psest_2600	0.60	-0.4
2,781,708	+		Psest_2600	0.60	+0.2
2,781,708	+		Psest_2600	0.60	-0.2
2,781,708	+		Psest_2600	0.60	+1.1
2,781,708	+		Psest_2600	0.60	+0.4
2,781,708	+		Psest_2600	0.60	-1.6
2,781,708	+		Psest_2600	0.60	+0.8
2,781,708	+		Psest_2600	0.60	-1.8
2,781,709	-		Psest_2600	0.60	+0.1
2,781,709	-		Psest_2600	0.60	+0.8
2,781,709	-		Psest_2600	0.60	-2.8
2,781,709	-		Psest_2600	0.60	+1.4
2,781,709	-		Psest_2600	0.60	+1.3
2,781,830	+		Psest_2600	0.70	+0.9
2,781,830	+		Psest_2600	0.70	-1.4
2,781,830	+		Psest_2600	0.70	-0.2
2,781,830	+		Psest_2600	0.70	-0.2
2,781,831	-		Psest_2600	0.70	+0.7
2,781,831	-		Psest_2600	0.70	+0.3
2,781,831	-		Psest_2600	0.70	+0.3
2,781,831	-		Psest_2600	0.70	-0.6
2,781,831	-		Psest_2600	0.70	+1.2
2,781,831	-		Psest_2600	0.70	+0.4