Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2251

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
2,399,477	-		Psest_2250	0.23	+0.4
2,399,542	+		Psest_2250	0.29	-0.6
2,399,654	+		Psest_2250	0.39	+0.1
2,399,654	+		Psest_2250	0.39	+0.5
2,399,729	-		Psest_2250	0.46	-2.6
2,399,729	-		Psest_2250	0.46	+0.4
2,400,144	+		Psest_2250	0.84	-1.7
2,400,144	+		Psest_2250	0.84	+0.6
2,400,144	+		Psest_2250	0.84	-2.4
2,400,145	-		Psest_2250	0.84	-0.2
2,400,145	-		Psest_2250	0.84	+0.3
2,400,145	-		Psest_2250	0.84	-0.2
2,400,150	+		Psest_2250	0.85	+0.6
2,400,151	-		Psest_2250	0.85	+0.3
2,400,151	-		Psest_2250	0.85	-0.7
2,400,260	-				+0.3
2,400,311	+				-1.3
2,400,353	+				+0.3
2,400,353	+				-0.0
2,400,353	+				-1.7
2,400,353	+				+2.5
2,400,353	+				-1.3
2,400,353	+				+0.3
2,400,354	-				+1.2
2,400,354	-				-1.0
2,400,354	-				+1.4
2,400,354	-				-1.1
2,400,354	-				-1.4
2,400,354	-				-0.2
2,400,354	-				-0.4
2,400,354	-				+0.5
2,400,358	-				+1.7
2,400,614	+		Psest_2251	0.23	-1.2
2,400,614	+		Psest_2251	0.23	-0.6
2,400,614	+		Psest_2251	0.23	+0.4
2,400,614	+		Psest_2251	0.23	+0.1
2,400,614	+		Psest_2251	0.23	+0.1
2,400,615	-		Psest_2251	0.23	+0.7
2,400,615	-		Psest_2251	0.23	+1.7
2,400,615	-		Psest_2251	0.23	-2.2
2,400,615	-		Psest_2251	0.23	-2.1
2,400,702	+		Psest_2251	0.31	+1.8
2,400,702	+		Psest_2251	0.31	-1.4
2,400,702	+		Psest_2251	0.31	-1.7
2,400,702	+		Psest_2251	0.31	+3.5
2,400,702	+		Psest_2251	0.31	+0.1
2,400,702	+		Psest_2251	0.31	-2.1
2,400,703	-		Psest_2251	0.32	-2.9
2,400,749	+		Psest_2251	0.36	-2.4
2,400,749	+		Psest_2251	0.36	+0.1
2,400,749	+		Psest_2251	0.36	-0.5
2,400,749	+		Psest_2251	0.36	-1.1
2,400,749	+		Psest_2251	0.36	+0.7
2,400,749	+		Psest_2251	0.36	+1.5
2,400,749	+		Psest_2251	0.36	+0.2
2,400,749	+		Psest_2251	0.36	-0.7
2,400,749	+		Psest_2251	0.36	+1.0
2,400,749	+		Psest_2251	0.36	-0.6
2,400,749	+		Psest_2251	0.36	-1.1
2,400,749	+		Psest_2251	0.36	+1.7
2,400,749	+		Psest_2251	0.36	+0.5
2,400,749	+		Psest_2251	0.36	+0.1
2,400,749	+		Psest_2251	0.36	+1.1
2,400,749	+		Psest_2251	0.36	-0.7
2,400,749	+		Psest_2251	0.36	+0.0
2,400,750	-		Psest_2251	0.36	+0.6
2,400,750	-		Psest_2251	0.36	+0.4
2,400,750	-		Psest_2251	0.36	-1.1
2,400,750	-		Psest_2251	0.36	+0.0
2,400,965	+		Psest_2251	0.56	+1.2
2,400,965	+		Psest_2251	0.56	+0.9
2,400,965	+		Psest_2251	0.56	+0.3
2,400,965	+		Psest_2251	0.56	+1.5
2,400,965	+		Psest_2251	0.56	-0.8
2,400,965	+		Psest_2251	0.56	+1.4
2,400,965	+		Psest_2251	0.56	+0.9
2,400,966	-		Psest_2251	0.56	+0.7
2,400,966	-		Psest_2251	0.56	-1.1
2,400,966	-		Psest_2251	0.56	+1.7
2,400,966	-		Psest_2251	0.56	-0.8
2,400,966	-		Psest_2251	0.56	+0.8
2,401,183	-		Psest_2251	0.76	-1.6
2,401,310	+		Psest_2251	0.88	-0.6
2,401,311	-		Psest_2251	0.88	+3.9
2,401,311	-		Psest_2251	0.88	-0.3
2,401,344	+				+1.1
2,401,344	+				+0.8
2,401,345	-				+0.7
2,401,345	-				+0.2
2,401,353	+				-1.6
2,401,498	+				+0.9
2,401,499	-				+0.7
2,401,809	+		Psest_2252	0.20	-0.1
2,401,809	+		Psest_2252	0.20	+0.1
2,401,809	+		Psest_2252	0.20	+0.4
2,401,810	-		Psest_2252	0.20	-1.0
2,401,921	+		Psest_2252	0.28	+0.5
2,401,922	-		Psest_2252	0.28	+2.9
2,401,944	+		Psest_2252	0.30	-0.1
2,401,944	+		Psest_2252	0.30	-1.4
2,401,945	-		Psest_2252	0.30	+1.3
2,401,945	-		Psest_2252	0.30	-1.3
2,401,945	-		Psest_2252	0.30	+0.8
2,401,945	-		Psest_2252	0.30	+0.3
2,401,945	-		Psest_2252	0.30	-0.6
2,401,987	-		Psest_2252	0.33	+0.6
2,402,020	+		Psest_2252	0.35	+1.1
2,402,092	+		Psest_2252	0.41	+0.3
2,402,237	-		Psest_2252	0.51	-0.2
2,402,335	+		Psest_2252	0.58	-1.1