Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2226

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
2,374,013	+				-2.5
2,374,014	-				-0.9
2,374,051	+				-0.9
2,374,103	+				-0.1
2,374,103	+				+0.7
2,374,103	+				-1.3
2,374,103	+				+0.5
2,374,103	+				+0.8
2,374,103	+				+0.1
2,374,104	-				-0.9
2,374,104	-				-3.4
2,374,104	-				-0.3
2,374,104	-				-0.1
2,374,104	-				-0.4
2,374,104	-				-0.3
2,374,104	-				-0.3
2,374,106	+				+0.9
2,374,106	+				+0.1
2,374,143	+				-0.7
2,374,143	+				+0.9
2,374,161	-				+0.1
2,374,161	-				+0.7
2,374,291	-				-1.4
2,374,299	+				-0.4
2,374,299	+				-0.2
2,374,300	-				+1.3
2,374,300	-				-1.4
2,374,300	-				-0.7
2,374,305	-				+2.9
2,374,496	+				-1.0
2,374,497	-				+0.4
2,374,497	-				+3.0
2,374,497	-				+1.4
2,374,498	+				+0.5
2,374,498	+				-2.3
2,374,499	-				-2.2
2,374,499	-				+2.2
2,374,527	+				-1.4
2,374,528	-				-0.7
2,374,620	+		Psest_2225	0.24	+1.4
2,374,661	+		Psest_2225	0.34	-0.5
2,374,662	-		Psest_2225	0.35	+0.3
2,374,662	-		Psest_2225	0.35	-0.7
2,374,709	+		Psest_2225	0.47	-1.7
2,374,910	-				-0.3
2,374,991	+				+1.0
2,374,991	+				+1.6
2,375,194	+		Psest_2226	0.11	+0.7
2,375,194	+		Psest_2226	0.11	-0.3
2,375,195	-		Psest_2226	0.11	-0.3
2,375,195	-		Psest_2226	0.11	-1.3
2,375,195	-		Psest_2226	0.11	-0.3
2,375,546	+		Psest_2226	0.28	+0.3
2,375,547	-		Psest_2226	0.28	-0.6
2,375,547	-		Psest_2226	0.28	-0.6
2,375,547	-		Psest_2226	0.28	+0.0
2,375,666	+		Psest_2226	0.34	-1.3
2,375,682	+		Psest_2226	0.35	+0.0
2,375,705	-		Psest_2226	0.36	-0.9
2,375,786	+		Psest_2226	0.40	-0.6
2,375,786	+		Psest_2226	0.40	-1.1
2,375,786	+		Psest_2226	0.40	-1.1
2,375,786	+		Psest_2226	0.40	+1.6
2,375,786	+		Psest_2226	0.40	-2.0
2,375,787	-		Psest_2226	0.40	+1.9
2,375,787	-		Psest_2226	0.40	-0.9
2,375,787	-		Psest_2226	0.40	+0.0
2,375,861	+		Psest_2226	0.44	+1.0
2,375,861	+		Psest_2226	0.44	-0.6
2,375,861	+		Psest_2226	0.44	-0.4
2,375,861	+		Psest_2226	0.44	-1.9
2,375,861	+		Psest_2226	0.44	+0.4
2,375,861	+		Psest_2226	0.44	+0.0
2,375,862	-		Psest_2226	0.44	-1.5
2,375,862	-		Psest_2226	0.44	-1.9
2,375,862	-		Psest_2226	0.44	-1.0
2,375,862	-		Psest_2226	0.44	+0.9
2,375,862	-		Psest_2226	0.44	-0.6
2,375,862	-		Psest_2226	0.44	-2.3
2,375,864	+		Psest_2226	0.44	+1.5
2,375,864	+		Psest_2226	0.44	-1.9
2,375,864	+		Psest_2226	0.44	-0.7
2,375,865	-		Psest_2226	0.44	-0.9
2,375,865	-		Psest_2226	0.44	-0.7
2,375,865	-		Psest_2226	0.44	+1.1
2,375,865	-		Psest_2226	0.44	+3.3
2,375,947	+		Psest_2226	0.48	+0.7
2,375,947	+		Psest_2226	0.48	-3.4
2,375,948	-		Psest_2226	0.48	+0.7
2,376,009	-		Psest_2226	0.51	-0.4
2,376,240	-		Psest_2226	0.62	-1.5
2,376,240	-		Psest_2226	0.62	-0.6
2,376,296	+		Psest_2226	0.65	+1.2
2,376,662	+		Psest_2226	0.83	-1.3
2,376,663	-		Psest_2226	0.83	+2.5
2,376,663	-		Psest_2226	0.83	+0.4
2,376,668	+		Psest_2226	0.83	-1.2
2,376,669	-		Psest_2226	0.83	-0.2
2,376,689	+		Psest_2226	0.84	-0.3
2,376,689	+		Psest_2226	0.84	-1.4
2,376,689	+		Psest_2226	0.84	+0.3
2,376,689	+		Psest_2226	0.84	+0.1
2,376,689	+		Psest_2226	0.84	+0.5
2,376,690	-		Psest_2226	0.84	-0.1
2,376,690	-		Psest_2226	0.84	+0.6
2,376,690	-		Psest_2226	0.84	-0.5
2,376,690	-		Psest_2226	0.84	-1.9
2,376,881	-				-0.6
2,376,975	-				+2.4
2,377,019	+				+0.4
2,377,020	-				-1.1
2,377,031	-				-0.0
2,377,109	-		Psest_2227	0.10	-0.7
2,377,109	-		Psest_2227	0.10	-0.9
2,377,176	+		Psest_2227	0.21	+1.7
2,377,177	-		Psest_2227	0.21	+2.0
2,377,177	-		Psest_2227	0.21	-2.7
2,377,177	-		Psest_2227	0.21	-1.8
2,377,177	-		Psest_2227	0.21	-0.3
2,377,177	-		Psest_2227	0.21	+1.8
2,377,180	+		Psest_2227	0.22	-0.7
2,377,509	+		Psest_2227	0.75	-0.9
2,377,509	+		Psest_2227	0.75	+0.8
2,377,509	+		Psest_2227	0.75	-0.6
2,377,509	+		Psest_2227	0.75	-2.4
2,377,509	+		Psest_2227	0.75	-1.4
2,377,509	+		Psest_2227	0.75	-1.6
2,377,510	-		Psest_2227	0.75	+0.5
2,377,510	-		Psest_2227	0.75	-1.9
2,377,510	-		Psest_2227	0.75	+3.0
2,377,510	-		Psest_2227	0.75	+0.4
2,377,510	-		Psest_2227	0.75	+2.1
2,377,510	-		Psest_2227	0.75	+0.8
2,377,510	-		Psest_2227	0.75	-0.1
2,377,510	-		Psest_2227	0.75	-0.9
2,377,562	+		Psest_2227	0.83	+0.3
2,377,563	-		Psest_2227	0.84	+1.7
2,377,730	+				-1.1
2,377,770	-				+0.1