Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1380

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
1,488,224	+		Psest_1378	0.62	+1.7
1,488,224	+		Psest_1378	0.62	-0.3
1,488,224	+		Psest_1378	0.62	+1.1
1,488,320	+		Psest_1378	0.75	+0.7
1,488,320	+		Psest_1378	0.75	+0.1
1,488,320	+		Psest_1378	0.75	-0.7
1,488,320	+		Psest_1378	0.75	+1.3
1,488,320	+		Psest_1378	0.75	-0.7
1,488,321	-		Psest_1378	0.75	+0.9
1,488,321	-		Psest_1378	0.75	+1.7
1,488,321	-		Psest_1378	0.75	+0.4
1,488,321	-		Psest_1378	0.75	-0.3
1,488,321	-		Psest_1378	0.75	-0.9
1,488,321	-		Psest_1378	0.75	+2.1
1,488,321	-		Psest_1378	0.75	+1.7
1,488,464	+				-0.9
1,488,464	+				+1.7
1,488,561	+				-0.9
1,488,562	-				-0.4
1,488,562	-				+1.1
1,488,708	-		Psest_1379	0.41	+0.1
1,489,080	-				-1.1
1,489,080	-				+2.3
1,489,082	+				+1.1
1,489,082	+				+0.4
1,489,082	+				+0.8
1,489,082	+				-0.3
1,489,083	-				-0.5
1,489,551	+		Psest_1380	0.23	+1.7
1,489,571	+		Psest_1380	0.24	+0.4
1,489,572	-		Psest_1380	0.24	+0.1
1,489,580	-		Psest_1380	0.24	+0.6
1,489,710	+		Psest_1380	0.31	+1.3
1,489,710	+		Psest_1380	0.31	+1.1
1,489,710	+		Psest_1380	0.31	+0.4
1,489,710	+		Psest_1380	0.31	-0.1
1,489,710	+		Psest_1380	0.31	-0.0
1,489,710	+		Psest_1380	0.31	+0.4
1,489,711	-		Psest_1380	0.31	+1.2
1,489,711	-		Psest_1380	0.31	+0.7
1,489,711	-		Psest_1380	0.31	-1.1
1,489,711	-		Psest_1380	0.31	-0.9
1,489,711	-		Psest_1380	0.31	-2.7
1,489,711	-		Psest_1380	0.31	+0.7
1,489,711	-		Psest_1380	0.31	+0.4
1,490,183	-		Psest_1380	0.57	-1.1
1,490,183	-		Psest_1380	0.57	+3.3
1,490,218	-		Psest_1380	0.59	+1.7
1,490,326	+		Psest_1380	0.65	+0.3
1,490,578	+		Psest_1380	0.78	+2.2
1,490,578	+		Psest_1380	0.78	+1.0
1,490,579	-		Psest_1380	0.78	+0.9
1,491,107	+				+0.1
1,491,245	+				-0.6
1,491,245	+				-0.3
1,491,245	+				+0.7
1,491,245	+				+4.7
1,491,245	+				+0.1
1,491,245	+				+0.6
1,491,245	+				+0.7
1,491,245	+				+0.0
1,491,245	+				-0.3
1,491,245	+				-0.0
1,491,246	-				-0.3
1,491,246	-				-0.9
1,491,246	-				+3.3
1,491,246	-				+0.9
1,491,246	-				-1.4
1,491,385	-		Psest_1381	0.19	+1.2
1,491,486	+		Psest_1381	0.29	+2.7
1,491,487	-		Psest_1381	0.29	+0.1
1,491,533	+		Psest_1381	0.34	-0.0
1,491,609	+		Psest_1381	0.42	+0.2
1,491,609	+		Psest_1381	0.42	+0.0
1,491,610	-		Psest_1381	0.42	+0.7
1,491,610	-		Psest_1381	0.42	+2.7
1,491,616	-		Psest_1381	0.43	+0.4
1,491,616	-		Psest_1381	0.43	+0.3
1,491,628	-		Psest_1381	0.44	-0.9
1,491,628	-		Psest_1381	0.44	+1.2
1,491,654	+		Psest_1381	0.47	-0.3
1,491,654	+		Psest_1381	0.47	+0.7
1,491,703	-		Psest_1381	0.52	-0.0