Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1323

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
1,423,127	+		Psest_1322	0.17	+0.1
1,423,359	+		Psest_1322	0.43	-1.2
1,423,467	+		Psest_1322	0.55	+0.2
1,423,843	+				+0.2
1,423,843	+				+1.0
1,423,843	+				+0.1
1,423,843	+				-0.8
1,423,844	-				+0.5
1,423,844	-				+0.6
1,423,844	-				-0.6
1,423,844	-				-1.1
1,424,116	+		Psest_1323	0.33	+1.0
1,424,133	+		Psest_1323	0.35	-2.5
1,424,133	+		Psest_1323	0.35	-2.6
1,424,133	+		Psest_1323	0.35	+0.6
1,424,133	+		Psest_1323	0.35	-1.5
1,424,133	+		Psest_1323	0.35	+0.1
1,424,133	+		Psest_1323	0.35	-0.9
1,424,134	-		Psest_1323	0.35	-1.1
1,424,134	-		Psest_1323	0.35	-1.9
1,424,395	-		Psest_1323	0.68	-0.4
1,424,400	-		Psest_1323	0.69	-2.6
1,424,578	-				+0.5
1,424,699	+				+0.7
1,424,699	+				-0.2
1,424,699	+				+1.4
1,424,699	+				+1.3
1,424,700	-				+0.7
1,424,700	-				+0.7
1,424,739	+				-1.5
1,424,739	+				-1.2
1,424,739	+				-0.3
1,424,739	+				-0.4
1,424,740	-				-0.9
1,424,740	-				+0.3
1,424,740	-				+0.1
1,424,740	-				+1.2
1,424,741	+				+1.2
1,424,741	+				+0.8
1,424,741	+				-1.3
1,424,741	+				+0.6
1,424,741	+				+1.7
1,424,741	+				-0.9
1,424,742	-				+0.4
1,424,742	-				-0.5
1,424,742	-				-3.0
1,424,742	-				-2.0
1,424,742	-				-0.9
1,424,742	-				+1.1
1,424,941	+		Psest_1324	0.13	-1.0
1,424,941	+		Psest_1324	0.13	-0.3
1,424,942	-		Psest_1324	0.13	-1.7
1,425,460	+		Psest_1324	0.52	+0.1
1,425,460	+		Psest_1324	0.52	-0.1
1,425,460	+		Psest_1324	0.52	-1.5
1,425,460	+		Psest_1324	0.52	-0.8
1,425,460	+		Psest_1324	0.52	-2.0
1,425,460	+		Psest_1324	0.52	+0.7
1,425,460	+		Psest_1324	0.52	+1.1
1,425,460	+		Psest_1324	0.52	+0.1
1,425,460	+		Psest_1324	0.52	+1.0
1,425,461	-		Psest_1324	0.52	+0.2
1,425,461	-		Psest_1324	0.52	+0.0
1,425,461	-		Psest_1324	0.52	+0.8
1,425,461	-		Psest_1324	0.52	+1.3
1,425,469	-		Psest_1324	0.52	+0.7