Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1320

Experiment: Def Neomycin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0008 mg/ml
1,419,735	+				-1.7
1,419,735	+				+0.6
1,419,736	-				+1.8
1,419,736	-				-1.5
1,419,736	-				+0.5
1,419,962	+		Psest_1319	0.36	-0.5
1,419,979	-		Psest_1319	0.39	+0.6
1,420,041	+		Psest_1319	0.46	-0.5
1,420,041	+		Psest_1319	0.46	+1.9
1,420,041	+		Psest_1319	0.46	+1.6
1,420,041	+		Psest_1319	0.46	+0.7
1,420,042	-		Psest_1319	0.46	+0.4
1,420,042	-		Psest_1319	0.46	-1.3
1,420,042	-		Psest_1319	0.46	+0.7
1,420,042	-		Psest_1319	0.46	-0.5
1,420,042	-		Psest_1319	0.46	-0.6
1,420,042	-		Psest_1319	0.46	+0.7
1,420,042	-		Psest_1319	0.46	+0.2
1,420,042	-		Psest_1319	0.46	+0.9
1,420,042	-		Psest_1319	0.46	+0.8
1,420,191	-		Psest_1319	0.64	+1.3
1,420,191	-		Psest_1319	0.64	-0.3
1,420,433	-				-0.3
1,420,729	+		Psest_1320	0.23	-0.0
1,420,735	+		Psest_1320	0.24	+0.4
1,420,735	+		Psest_1320	0.24	-0.6
1,420,736	-		Psest_1320	0.24	-0.3
1,420,736	-		Psest_1320	0.24	+0.4
1,420,736	-		Psest_1320	0.24	+1.6
1,420,903	+		Psest_1320	0.43	+1.2
1,420,904	-		Psest_1320	0.44	+2.3
1,420,904	-		Psest_1320	0.44	+2.2
1,421,076	+		Psest_1320	0.64	+1.1
1,421,076	+		Psest_1320	0.64	-2.2
1,421,185	+		Psest_1320	0.77	+0.5
1,421,185	+		Psest_1320	0.77	-2.0
1,421,237	-		Psest_1320	0.83	+0.5
1,421,333	+				+1.3
1,421,333	+				+1.3
1,421,333	+				-1.5
1,421,334	-				-0.9
1,421,405	-				+2.9
1,421,427	+				-0.9
1,421,427	+				-0.0
1,421,427	+				-3.5
1,421,508	+				-0.6
1,421,508	+				+1.7
1,421,509	-				+0.1
1,421,547	+				-2.2
1,421,711	+				-0.6
1,421,711	+				-1.5
1,421,712	-				+1.5
1,421,712	-				-0.6
1,421,712	-				-1.1
1,421,716	-				-1.0
1,421,716	-				-0.3
1,421,754	+				-0.2
1,421,901	-				-0.9
1,421,934	+				-0.4
1,421,935	-				-0.6