Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3711

Experiment: Def Neomycin 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0002 mg/ml
3,874,029	+		Psest_3710	0.38	-2.8
3,874,130	-		Psest_3710	0.45	-1.4
3,874,171	+		Psest_3710	0.48	-0.8
3,874,171	+		Psest_3710	0.48	-0.5
3,874,171	+		Psest_3710	0.48	+0.2
3,874,171	+		Psest_3710	0.48	+0.2
3,874,171	+		Psest_3710	0.48	+0.2
3,874,171	+		Psest_3710	0.48	-0.2
3,874,171	+		Psest_3710	0.48	+0.4
3,874,171	+		Psest_3710	0.48	-0.8
3,874,171	+		Psest_3710	0.48	-1.1
3,874,171	+		Psest_3710	0.48	-0.2
3,874,171	+		Psest_3710	0.48	+0.8
3,874,171	+		Psest_3710	0.48	-0.7
3,874,171	+		Psest_3710	0.48	-0.9
3,874,172	-		Psest_3710	0.48	-0.6
3,874,172	-		Psest_3710	0.48	-1.6
3,874,172	-		Psest_3710	0.48	-0.9
3,874,172	-		Psest_3710	0.48	+2.2
3,874,172	-		Psest_3710	0.48	+0.2
3,874,172	-		Psest_3710	0.48	-1.4
3,874,172	-		Psest_3710	0.48	-0.8
3,874,172	-		Psest_3710	0.48	-1.7
3,874,172	-		Psest_3710	0.48	+0.2
3,874,172	-		Psest_3710	0.48	+0.2
3,874,172	-		Psest_3710	0.48	-0.5
3,874,172	-		Psest_3710	0.48	-0.1
3,874,172	-		Psest_3710	0.48	-0.9
3,874,172	-		Psest_3710	0.48	-0.0
3,874,175	+		Psest_3710	0.48	-0.5
3,874,175	+		Psest_3710	0.48	-1.3
3,874,175	+		Psest_3710	0.48	-1.9
3,874,175	+		Psest_3710	0.48	+1.8
3,874,175	+		Psest_3710	0.48	-0.4
3,874,175	+		Psest_3710	0.48	-0.3
3,874,176	-		Psest_3710	0.48	-0.6
3,874,176	-		Psest_3710	0.48	-0.7
3,874,176	-		Psest_3710	0.48	-0.7
3,874,176	-		Psest_3710	0.48	-1.1
3,874,177	+		Psest_3710	0.48	-1.7
3,874,177	+		Psest_3710	0.48	-0.7
3,874,177	+		Psest_3710	0.48	-1.8
3,874,177	+		Psest_3710	0.48	-0.7
3,874,177	+		Psest_3710	0.48	+2.8
3,874,177	+		Psest_3710	0.48	+0.3
3,874,177	+		Psest_3710	0.48	-1.4
3,874,177	+		Psest_3710	0.48	-1.0
3,874,177	+		Psest_3710	0.48	-0.2
3,874,177	+		Psest_3710	0.48	-0.2
3,874,177	+		Psest_3710	0.48	-0.2
3,874,177	+		Psest_3710	0.48	-1.1
3,874,177	+		Psest_3710	0.48	-1.3
3,874,177	+		Psest_3710	0.48	-2.9
3,874,177	+		Psest_3710	0.48	-0.1
3,874,177	+		Psest_3710	0.48	-0.2
3,874,177	+		Psest_3710	0.48	-0.6
3,874,177	+		Psest_3710	0.48	-1.1
3,874,177	+		Psest_3710	0.48	-0.2
3,874,178	-		Psest_3710	0.48	-1.1
3,874,178	-		Psest_3710	0.48	-1.8
3,874,178	-		Psest_3710	0.48	+0.8
3,874,178	-		Psest_3710	0.48	-1.1
3,874,178	-		Psest_3710	0.48	-0.2
3,874,178	-		Psest_3710	0.48	-0.6
3,874,178	-		Psest_3710	0.48	-0.8
3,874,178	-		Psest_3710	0.48	-0.6
3,874,178	-		Psest_3710	0.48	+0.0
3,874,178	-		Psest_3710	0.48	-3.0
3,874,178	-		Psest_3710	0.48	-0.7
3,874,178	-		Psest_3710	0.48	-0.4
3,874,178	-		Psest_3710	0.48	-1.3
3,874,178	-		Psest_3710	0.48	-1.8
3,874,308	+		Psest_3710	0.58	+1.2
3,874,308	+		Psest_3710	0.58	+0.5
3,874,308	+		Psest_3710	0.58	-2.1
3,874,309	-		Psest_3710	0.58	+0.5
3,874,309	-		Psest_3710	0.58	-0.8
3,874,393	-		Psest_3710	0.63	+0.8
3,874,528	+		Psest_3710	0.73	-0.8
3,874,528	+		Psest_3710	0.73	+0.2
3,874,528	+		Psest_3710	0.73	-1.5
3,874,528	+		Psest_3710	0.73	-0.2
3,874,528	+		Psest_3710	0.73	-0.3
3,874,528	+		Psest_3710	0.73	-1.1
3,874,528	+		Psest_3710	0.73	-0.9
3,874,528	+		Psest_3710	0.73	+0.2
3,874,529	-		Psest_3710	0.73	-0.2
3,874,529	-		Psest_3710	0.73	-0.7
3,874,529	-		Psest_3710	0.73	-0.1
3,874,529	-		Psest_3710	0.73	-0.4
3,874,529	-		Psest_3710	0.73	-0.7
3,874,711	+		Psest_3710	0.86	+0.8
3,874,711	+		Psest_3710	0.86	-3.0
3,874,711	+		Psest_3710	0.86	-0.2
3,874,711	+		Psest_3710	0.86	+0.3
3,874,711	+		Psest_3710	0.86	-1.8
3,874,711	+		Psest_3710	0.86	+0.3
3,874,711	+		Psest_3710	0.86	-0.8
3,874,712	-		Psest_3710	0.86	-0.7
3,874,712	-		Psest_3710	0.86	-0.6
3,874,712	-		Psest_3710	0.86	-0.2
3,874,712	-		Psest_3710	0.86	-0.2
3,874,807	+				-1.6
3,874,808	-				-1.8
3,874,808	-				-0.7
3,874,942	+				-1.2
3,874,943	-				+0.2
3,874,943	-				+0.2
3,874,943	-				-0.9
3,874,943	-				-0.3
3,874,943	-				-0.8
3,874,943	-				-1.1
3,874,943	-				+0.8
3,874,943	-				-1.4
3,874,943	-				+0.2
3,874,943	-				-0.7
3,874,946	+				-0.7
3,874,946	+				-1.2
3,874,946	+				-0.1
3,874,947	-				+0.3
3,874,947	-				-0.3
3,875,100	+				-1.2
3,875,101	-				-1.1
3,875,157	+				-0.7
3,875,157	+				-1.1
3,875,157	+				+0.2
3,875,157	+				-3.1
3,875,157	+				-1.2
3,875,157	+				-0.1
3,875,158	-				+1.8
3,875,158	-				-0.7
3,875,358	+				-0.1
3,875,358	+				-1.7
3,875,358	+				+0.4
3,875,358	+				-0.6
3,875,358	+				-0.6
3,875,359	-				+0.8
3,875,359	-				+0.8
3,875,359	-				-0.8
3,875,472	+		Psest_3711	0.10	+0.9
3,875,474	+		Psest_3711	0.10	-0.8
3,875,474	+		Psest_3711	0.10	+0.8
3,875,474	+		Psest_3711	0.10	-0.2
3,875,474	+		Psest_3711	0.10	+0.2
3,875,474	+		Psest_3711	0.10	-1.6
3,875,474	+		Psest_3711	0.10	-0.1
3,875,474	+		Psest_3711	0.10	-1.3
3,875,474	+		Psest_3711	0.10	-0.6
3,875,474	+		Psest_3711	0.10	-0.7
3,875,474	+		Psest_3711	0.10	-0.4
3,875,474	+		Psest_3711	0.10	+0.1
3,875,474	+		Psest_3711	0.10	+0.8
3,875,474	+		Psest_3711	0.10	-0.7
3,875,474	+		Psest_3711	0.10	-0.9
3,875,475	-		Psest_3711	0.10	-0.2
3,875,475	-		Psest_3711	0.10	-3.3
3,875,475	-		Psest_3711	0.10	-0.8
3,875,475	-		Psest_3711	0.10	+0.2
3,875,475	-		Psest_3711	0.10	-0.8
3,875,475	-		Psest_3711	0.10	+0.2
3,875,475	-		Psest_3711	0.10	-1.5
3,875,574	+		Psest_3711	0.12	+0.6
3,875,598	+		Psest_3711	0.13	+0.3
3,875,598	+		Psest_3711	0.13	-0.2
3,875,599	-		Psest_3711	0.13	-1.5
3,875,599	-		Psest_3711	0.13	-0.5
3,876,156	+		Psest_3711	0.26	-0.9
3,876,156	+		Psest_3711	0.26	-1.6
3,876,156	+		Psest_3711	0.26	+1.7
3,876,157	-		Psest_3711	0.26	-0.9
3,876,404	-		Psest_3711	0.31	-2.2
3,876,417	+		Psest_3711	0.31	-0.8
3,876,417	+		Psest_3711	0.31	-1.2
3,876,418	-		Psest_3711	0.31	-1.6
3,876,543	+		Psest_3711	0.34	-1.2
3,876,543	+		Psest_3711	0.34	-0.6
3,876,543	+		Psest_3711	0.34	+0.2
3,876,543	+		Psest_3711	0.34	-0.3
3,876,544	-		Psest_3711	0.34	+0.3
3,876,544	-		Psest_3711	0.34	+0.2
3,876,544	-		Psest_3711	0.34	-1.7
3,876,544	-		Psest_3711	0.34	+0.4
3,876,544	-		Psest_3711	0.34	-1.2
3,876,544	-		Psest_3711	0.34	+1.7
3,876,544	-		Psest_3711	0.34	-2.8
3,876,705	+		Psest_3711	0.38	+0.7
3,876,706	-		Psest_3711	0.38	-0.3
3,876,880	+		Psest_3711	0.42	+2.7
3,876,880	+		Psest_3711	0.42	-0.8
3,876,881	-		Psest_3711	0.42	-1.4
3,876,881	-		Psest_3711	0.42	-1.3
3,877,032	+		Psest_3711	0.45	-1.6
3,877,032	+		Psest_3711	0.45	-0.3
3,877,083	+		Psest_3711	0.46	-1.3
3,877,083	+		Psest_3711	0.46	+0.2
3,877,084	-		Psest_3711	0.46	-0.5
3,877,380	+		Psest_3711	0.53	+2.3
3,877,432	-		Psest_3711	0.54	-1.6
3,877,447	-		Psest_3711	0.55	-0.4
3,877,681	+		Psest_3711	0.60	-1.5
3,877,720	-		Psest_3711	0.61	-1.3
3,877,720	-		Psest_3711	0.61	-2.3
3,877,720	-		Psest_3711	0.61	-0.9
3,877,720	-		Psest_3711	0.61	-0.7
3,877,720	-		Psest_3711	0.61	-0.8
3,877,720	-		Psest_3711	0.61	+0.1
3,877,720	-		Psest_3711	0.61	+0.2
3,877,950	+		Psest_3711	0.66	+0.7
3,877,951	-		Psest_3711	0.66	+0.3
3,877,951	-		Psest_3711	0.66	-0.6
3,877,956	+		Psest_3711	0.66	-0.6
3,877,957	-		Psest_3711	0.66	-1.0
3,878,074	+		Psest_3711	0.69	+0.2
3,878,082	+		Psest_3711	0.69	+0.7
3,878,082	+		Psest_3711	0.69	+1.7
3,878,082	+		Psest_3711	0.69	-0.3
3,878,082	+		Psest_3711	0.69	-1.5
3,878,083	-		Psest_3711	0.69	+1.2
3,878,083	-		Psest_3711	0.69	-1.5
3,878,083	-		Psest_3711	0.69	-0.6
3,878,094	+		Psest_3711	0.69	+0.2
3,878,094	+		Psest_3711	0.69	-0.1
3,878,094	+		Psest_3711	0.69	-0.6
3,878,094	+		Psest_3711	0.69	+1.7
3,878,094	+		Psest_3711	0.69	-0.3
3,878,094	+		Psest_3711	0.69	-1.1
3,878,094	+		Psest_3711	0.69	-0.6
3,878,094	+		Psest_3711	0.69	+1.2
3,878,094	+		Psest_3711	0.69	+0.7
3,878,094	+		Psest_3711	0.69	-0.4
3,878,095	-		Psest_3711	0.69	-1.7
3,878,095	-		Psest_3711	0.69	-1.5
3,878,118	+		Psest_3711	0.70	-0.6
3,878,118	+		Psest_3711	0.70	-0.2
3,878,118	+		Psest_3711	0.70	+1.7
3,878,118	+		Psest_3711	0.70	+0.7
3,878,119	-		Psest_3711	0.70	-0.3
3,878,119	-		Psest_3711	0.70	-0.3
3,878,119	-		Psest_3711	0.70	+0.2
3,878,119	-		Psest_3711	0.70	-0.8
3,878,119	-		Psest_3711	0.70	-2.3
3,878,119	-		Psest_3711	0.70	-0.1
3,878,191	+		Psest_3711	0.71	+0.3
3,878,191	+		Psest_3711	0.71	-0.4
3,878,191	+		Psest_3711	0.71	-0.8
3,878,191	+		Psest_3711	0.71	+0.5
3,878,191	+		Psest_3711	0.71	-0.3
3,878,191	+		Psest_3711	0.71	-1.3
3,878,191	+		Psest_3711	0.71	-2.0
3,878,191	+		Psest_3711	0.71	-0.5
3,878,192	-		Psest_3711	0.71	-0.5
3,878,193	+		Psest_3711	0.71	+1.2
3,878,193	+		Psest_3711	0.71	+0.2
3,878,194	-		Psest_3711	0.71	+0.2
3,878,319	+		Psest_3711	0.74	-1.8
3,878,353	+		Psest_3711	0.75	+0.7
3,878,354	-		Psest_3711	0.75	-1.4
3,878,354	-		Psest_3711	0.75	-2.6
3,878,355	+		Psest_3711	0.75	-0.8
3,878,355	+		Psest_3711	0.75	+0.5
3,878,355	+		Psest_3711	0.75	+0.5
3,878,355	+		Psest_3711	0.75	+0.4
3,878,355	+		Psest_3711	0.75	-1.1
3,878,355	+		Psest_3711	0.75	+1.7
3,878,356	-		Psest_3711	0.75	-0.4
3,878,490	+		Psest_3711	0.78	-1.0
3,878,828	-		Psest_3711	0.86	-1.3
3,878,828	-		Psest_3711	0.86	+0.2
3,878,828	-		Psest_3711	0.86	+0.7
3,878,934	+		Psest_3711	0.88	-0.3
3,878,934	+		Psest_3711	0.88	-0.4
3,878,934	+		Psest_3711	0.88	-0.3
3,878,935	-		Psest_3711	0.88	-0.9
3,878,935	-		Psest_3711	0.88	-0.4
3,878,935	-		Psest_3711	0.88	+1.2
3,878,935	-		Psest_3711	0.88	-1.2
3,878,935	-		Psest_3711	0.88	-0.3
3,879,035	+				+0.6
3,879,036	-				-1.6
3,879,036	-				-0.4
3,879,371	+				-0.3
3,879,372	-				-0.1
3,879,372	-				-1.6
3,879,372	-				-0.8
3,879,372	-				-2.0
3,879,372	-				-0.1
3,879,372	-				-1.4
3,879,428	-				-0.1
3,879,466	+				+0.7
3,879,493	+				+1.7
3,879,562	+				-0.4
3,879,562	+				-0.4
3,879,562	+				+1.7
3,879,563	-				-0.0
3,879,574	+				-0.3
3,879,575	-				+0.2
3,879,772	-				-0.8
3,879,780	-				+0.0
3,879,780	-				+2.0
3,879,780	-				+0.6
3,879,780	-				+0.6
3,879,780	-				+1.2
3,879,822	+		Psest_3712	0.12	+0.7
3,879,823	-		Psest_3712	0.12	-0.8
3,879,823	-		Psest_3712	0.12	+0.2
3,879,890	+		Psest_3712	0.16	+1.7
3,879,890	+		Psest_3712	0.16	+0.4
3,879,891	-		Psest_3712	0.16	-2.3
3,879,891	-		Psest_3712	0.16	-0.3
3,880,196	-		Psest_3712	0.36	-0.3
3,880,299	+		Psest_3712	0.43	+0.6
3,880,401	+		Psest_3712	0.49	+0.4