Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0152

Experiment: Def Neomycin 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0002 mg/ml
151,299	-		Psest_0151	0.49	+0.5
151,654	-		Psest_0151	0.76	-0.6
151,654	-		Psest_0151	0.76	+0.2
151,809	+		Psest_0151	0.88	+0.2
151,809	+		Psest_0151	0.88	+0.2
151,809	+		Psest_0151	0.88	-0.8
151,809	+		Psest_0151	0.88	-0.2
151,809	+		Psest_0151	0.88	-0.3
151,809	+		Psest_0151	0.88	+0.6
151,810	-		Psest_0151	0.88	-1.0
151,862	-				-0.5
152,058	+				+1.5
152,058	+				-0.5
152,059	-				-0.8
152,059	-				-0.6
152,060	+				+0.9
152,060	+				+0.8
152,060	+				-0.7
152,060	+				-0.3
152,060	+				+0.1
152,061	-				-3.8
152,061	-				-3.6
152,111	-				-2.0
152,111	-				-1.2
152,111	-				-4.2
152,117	+				-1.2
152,117	+				-1.8
152,118	-				-3.5
152,118	-				-3.4
152,118	-				-2.7
152,121	+				-3.1
152,122	-				+0.2
152,122	-				-4.2
152,122	-				-2.0
152,339	-		Psest_0152	0.40	-4.9
152,339	-		Psest_0152	0.40	-2.6
152,387	+		Psest_0152	0.48	-2.2
152,387	+		Psest_0152	0.48	-1.7
152,388	-		Psest_0152	0.49	-2.3
152,388	-		Psest_0152	0.49	-2.8
152,465	+		Psest_0152	0.62	-5.8
152,466	-		Psest_0152	0.62	-3.5
152,466	-		Psest_0152	0.62	-1.6
152,555	-		Psest_0152	0.77	-2.5
152,690	+				-3.6
152,691	-				-2.3
153,139	+		Psest_0153	0.70	-4.9
153,139	+		Psest_0153	0.70	-3.3
153,139	+		Psest_0153	0.70	-2.5
153,139	+		Psest_0153	0.70	-3.0
153,139	+		Psest_0153	0.70	-2.3
153,140	-		Psest_0153	0.70	-2.8
153,140	-		Psest_0153	0.70	-3.5
153,140	-		Psest_0153	0.70	+0.8
153,154	+		Psest_0153	0.72	-4.2
153,154	+		Psest_0153	0.72	-3.5
153,154	+		Psest_0153	0.72	-4.8
153,154	+		Psest_0153	0.72	-1.2
153,154	+		Psest_0153	0.72	-3.9
153,154	+		Psest_0153	0.72	-1.9
153,155	-		Psest_0153	0.72	-3.8
153,155	-		Psest_0153	0.72	-3.1
153,155	-		Psest_0153	0.72	-4.6
153,155	-		Psest_0153	0.72	-4.1
153,155	-		Psest_0153	0.72	-2.5
153,155	-		Psest_0153	0.72	-4.5
153,155	-		Psest_0153	0.72	-3.4
153,155	-		Psest_0153	0.72	-6.0
153,155	-		Psest_0153	0.72	-0.5
153,155	-		Psest_0153	0.72	-5.1
153,155	-		Psest_0153	0.72	-2.8
153,155	-		Psest_0153	0.72	-2.3
153,157	+		Psest_0153	0.73	-2.3
153,157	+		Psest_0153	0.73	-4.2
153,157	+		Psest_0153	0.73	-2.3
153,157	+		Psest_0153	0.73	-2.7
153,157	+		Psest_0153	0.73	-4.2
153,157	+		Psest_0153	0.73	-3.5
153,157	+		Psest_0153	0.73	-5.1
153,157	+		Psest_0153	0.73	-0.4
153,158	-		Psest_0153	0.73	-1.9
153,158	-		Psest_0153	0.73	-2.5
153,158	-		Psest_0153	0.73	-2.4
153,158	-		Psest_0153	0.73	-1.9
153,158	-		Psest_0153	0.73	-2.9
153,158	-		Psest_0153	0.73	-2.9
153,158	-		Psest_0153	0.73	-3.8
153,158	-		Psest_0153	0.73	-2.0
153,328	+				+1.0
153,328	+				+0.2
153,329	-				-3.2
153,329	-				-1.8
153,329	-				-1.7
153,499	+		Psest_0154	0.64	+1.2
153,499	+		Psest_0154	0.64	-0.7
153,499	+		Psest_0154	0.64	-0.8
153,500	-		Psest_0154	0.65	-2.3
153,502	+		Psest_0154	0.66	+0.1
153,502	+		Psest_0154	0.66	-0.7
153,502	+		Psest_0154	0.66	-0.3
153,502	+		Psest_0154	0.66	-0.9
153,502	+		Psest_0154	0.66	-1.1
153,502	+		Psest_0154	0.66	-0.2
153,502	+		Psest_0154	0.66	+0.1
153,502	+		Psest_0154	0.66	+0.3
153,502	+		Psest_0154	0.66	+1.8
153,502	+		Psest_0154	0.66	+0.1
153,503	-		Psest_0154	0.66	-3.8
153,503	-		Psest_0154	0.66	-2.2
153,503	-		Psest_0154	0.66	-3.3
153,503	-		Psest_0154	0.66	-3.0
153,503	-		Psest_0154	0.66	-3.5
153,503	-		Psest_0154	0.66	-2.3