Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1178

Experiment: Def Neomycin 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Neomycin 0.0002 mg/ml
1,279,699	+				+1.1
1,279,699	+				+0.2
1,279,699	+				-0.1
1,279,699	+				+0.1
1,279,699	+				-0.9
1,279,699	+				-1.3
1,279,699	+				-0.3
1,279,699	+				+1.6
1,279,700	-				+0.4
1,279,700	-				+0.6
1,279,700	-				-0.4
1,279,700	-				+0.2
1,279,700	-				+0.0
1,279,700	-				+1.1
1,279,759	+				+1.6
1,279,852	+				-0.1
1,279,853	-				+0.4
1,279,853	-				-0.1
1,279,918	+		Psest_1178	0.13	-0.7
1,279,919	-		Psest_1178	0.13	+1.5
1,279,919	-		Psest_1178	0.13	+0.6
1,279,993	+		Psest_1178	0.18	+0.3
1,279,993	+		Psest_1178	0.18	+0.0
1,280,488	+		Psest_1178	0.57	+0.9
1,280,488	+		Psest_1178	0.57	-0.7
1,280,488	+		Psest_1178	0.57	+0.8
1,280,488	+		Psest_1178	0.57	-2.1
1,280,489	-		Psest_1178	0.57	+0.9
1,280,489	-		Psest_1178	0.57	+0.8
1,280,489	-		Psest_1178	0.57	+0.0
1,280,489	-		Psest_1178	0.57	+0.5
1,280,489	-		Psest_1178	0.57	+0.8
1,280,489	-		Psest_1178	0.57	+1.0
1,280,494	+		Psest_1178	0.58	-0.5
1,280,494	+		Psest_1178	0.58	-1.0
1,280,495	-		Psest_1178	0.58	+0.1
1,280,495	-		Psest_1178	0.58	+1.0
1,280,680	-		Psest_1178	0.72	+1.2
1,281,043	+				+0.5
1,281,043	+				+0.8
1,281,043	+				+1.3
1,281,043	+				+0.5
1,281,043	+				+0.5
1,281,043	+				-0.9
1,281,043	+				+0.2
1,281,044	-				+0.6
1,281,044	-				-1.1
1,281,044	-				+0.2
1,281,044	-				+0.3
1,281,044	-				+0.1
1,281,251	-				-0.6
1,281,360	-				+0.4
1,281,902	+		Psest_1179	0.61	-0.2
1,281,902	+		Psest_1179	0.61	+1.2