Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0662
Experiment: Def A22 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Def A22 0.015 mg/ml |
---|---|---|---|---|---|
remove | |||||
719,686 | + | Psest_0661 | 0.61 | +1.1 | |
719,686 | + | Psest_0661 | 0.61 | -0.7 | |
719,686 | + | Psest_0661 | 0.61 | +1.1 | |
719,687 | - | Psest_0661 | 0.61 | -0.6 | |
719,687 | - | Psest_0661 | 0.61 | -0.3 | |
719,687 | - | Psest_0661 | 0.61 | -2.5 | |
720,712 | + | Psest_0662 | 0.33 | +0.1 | |
720,760 | + | Psest_0662 | 0.41 | +1.7 | |
720,760 | + | Psest_0662 | 0.41 | +0.4 | |
720,761 | - | Psest_0662 | 0.41 | +1.4 | |
721,091 | + | +0.3 | |||
721,255 | + | +2.3 | |||
721,256 | - | -0.2 | |||
721,343 | + | -0.9 | |||
721,619 | + | Psest_0663 | 0.22 | +0.5 | |
721,619 | + | Psest_0663 | 0.22 | +0.1 | |
721,620 | - | Psest_0663 | 0.22 | -0.4 | |
721,620 | - | Psest_0663 | 0.22 | -0.9 | |
721,620 | - | Psest_0663 | 0.22 | -0.5 | |
721,620 | - | Psest_0663 | 0.22 | +0.3 | |
721,845 | + | Psest_0663 | 0.35 | +0.9 |
Or see this region's nucleotide sequence