Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3761

Experiment: Def A22 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def A22 0.015 mg/ml
3,929,737	-				+0.5
3,929,737	-				-0.3
3,929,744	-				-0.1
3,929,744	-				-0.1
3,929,745	+				-0.1
3,929,745	+				+0.2
3,929,745	+				+1.0
3,929,745	+				+0.9
3,929,745	+				+0.2
3,929,745	+				-0.7
3,929,745	+				+0.4
3,929,745	+				+0.9
3,929,745	+				+0.2
3,929,745	+				+0.7
3,929,745	+				+0.2
3,929,745	+				-0.7
3,929,745	+				-0.2
3,929,745	+				+0.2
3,929,745	+				-0.2
3,929,745	+				+0.2
3,929,745	+				+0.5
3,929,745	+				+0.3
3,929,745	+				-0.3
3,929,745	+				-0.1
3,929,746	-				+0.7
3,929,746	-				+0.6
3,929,746	-				+0.7
3,929,746	-				-0.2
3,929,746	-				-0.4
3,929,746	-				+1.0
3,929,746	-				-0.6
3,929,746	-				-0.3
3,929,746	-				+0.0
3,929,746	-				+0.6
3,929,746	-				-0.7
3,929,746	-				-0.3
3,929,746	-				+1.0
3,929,746	-				+0.3
3,929,746	-				-0.4
3,929,746	-				+0.3
3,929,746	-				-0.5
3,929,876	-		Psest_3759	0.11	+0.9
3,929,876	-		Psest_3759	0.11	-0.7
3,929,876	-		Psest_3759	0.11	+0.3
3,929,876	-		Psest_3759	0.11	-0.2
3,929,876	-		Psest_3759	0.11	-0.8
3,930,001	-		Psest_3759	0.38	-1.4
3,930,001	-		Psest_3759	0.38	-0.1
3,930,074	+		Psest_3759	0.53	-0.4
3,930,074	+		Psest_3759	0.53	+0.9
3,930,074	+		Psest_3759	0.53	-1.2
3,930,074	+		Psest_3759	0.53	-0.6
3,930,074	+		Psest_3759	0.53	-1.1
3,930,074	+		Psest_3759	0.53	+0.5
3,930,075	-		Psest_3759	0.54	+0.3
3,930,075	-		Psest_3759	0.54	-0.4
3,930,075	-		Psest_3759	0.54	+0.3
3,930,075	-		Psest_3759	0.54	-0.3
3,930,075	-		Psest_3759	0.54	+0.0
3,930,075	-		Psest_3759	0.54	-1.1
3,930,075	-		Psest_3759	0.54	-1.4
3,930,075	-		Psest_3759	0.54	-0.3
3,930,075	-		Psest_3759	0.54	-0.9
3,930,075	-		Psest_3759	0.54	-0.7
3,930,075	-		Psest_3759	0.54	-0.5
3,930,075	-		Psest_3759	0.54	+0.3
3,930,075	-		Psest_3759	0.54	-0.7
3,930,174	+		Psest_3759	0.75	+0.6
3,930,289	+				-0.5
3,930,290	-				-0.1
3,930,309	+				-1.2
3,930,310	-				-0.1
3,930,331	+				+0.4
3,930,332	-				-0.1
3,930,381	+				-0.1
3,930,381	+				-0.6
3,930,455	+				-0.8
3,930,455	+				+0.6
3,930,455	+				+0.3
3,930,456	-				-0.2
3,930,456	-				+0.7
3,930,456	-				-1.4
3,930,488	+				-0.7
3,930,488	+				-0.2
3,930,489	-				+1.5
3,930,666	+				-0.3
3,930,833	+		Psest_3761	0.37	-1.4
3,930,833	+		Psest_3761	0.37	+0.0
3,930,833	+		Psest_3761	0.37	-0.6
3,930,877	+		Psest_3761	0.48	-0.8
3,930,877	+		Psest_3761	0.48	-0.6
3,930,877	+		Psest_3761	0.48	+0.9
3,931,178	+				+0.2
3,931,179	-				+1.1
3,931,179	-				+0.9
3,931,195	+				+1.1
3,931,250	+				+0.2
3,931,250	+				-0.6
3,931,250	+				+0.0
3,931,516	+		Psest_3762	0.80	-0.1
3,931,516	+		Psest_3762	0.80	-0.2
3,931,516	+		Psest_3762	0.80	-2.1
3,931,516	+		Psest_3762	0.80	-0.7
3,931,516	+		Psest_3762	0.80	-0.5
3,931,517	-		Psest_3762	0.80	-0.3
3,931,517	-		Psest_3762	0.80	-0.8
3,931,517	-		Psest_3762	0.80	+0.3
3,931,517	-		Psest_3762	0.80	-0.2
3,931,517	-		Psest_3762	0.80	-0.8
3,931,517	-		Psest_3762	0.80	-0.7
3,931,708	-				-0.3