Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1412

Experiment: Def A22 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def A22 0.015 mg/ml
1,518,261	+				+0.5
1,518,261	+				-0.8
1,518,359	+				-0.1
1,518,360	-				-0.1
1,518,360	-				-0.2
1,518,360	-				+0.7
1,518,368	+				+0.0
1,518,369	-				-0.4
1,518,369	-				-0.0
1,518,444	+		Psest_1411	0.19	+0.9
1,518,445	-		Psest_1411	0.19	-0.5
1,518,445	-		Psest_1411	0.19	-0.5
1,518,446	+		Psest_1411	0.19	+0.2
1,518,446	+		Psest_1411	0.19	+0.0
1,518,446	+		Psest_1411	0.19	-1.5
1,518,446	+		Psest_1411	0.19	-0.5
1,518,446	+		Psest_1411	0.19	-0.5
1,518,446	+		Psest_1411	0.19	+0.9
1,518,446	+		Psest_1411	0.19	-0.1
1,518,446	+		Psest_1411	0.19	-0.6
1,518,446	+		Psest_1411	0.19	+0.2
1,518,446	+		Psest_1411	0.19	-0.1
1,518,446	+		Psest_1411	0.19	-0.8
1,518,447	-		Psest_1411	0.19	+0.5
1,518,447	-		Psest_1411	0.19	+0.6
1,518,447	-		Psest_1411	0.19	-1.3
1,518,447	-		Psest_1411	0.19	+0.5
1,518,707	+		Psest_1411	0.54	+0.5
1,518,707	+		Psest_1411	0.54	-2.3
1,519,004	+				-0.8
1,519,005	-				+0.1
1,519,078	-				+0.2
1,519,104	+				-0.1
1,519,120	+				+0.9
1,519,120	+				-0.1
1,519,120	+				+0.5
1,519,120	+				+1.5
1,519,120	+				-0.7
1,519,120	+				+0.3
1,519,121	-				-0.8
1,519,121	-				+0.8
1,519,121	-				-0.8
1,519,121	-				-0.9
1,519,307	+		Psest_1412	0.11	-0.8
1,519,307	+		Psest_1412	0.11	-2.7
1,519,308	-		Psest_1412	0.11	-0.8
1,519,577	+		Psest_1412	0.35	-0.5
1,519,738	+		Psest_1412	0.49	+0.0
1,519,738	+		Psest_1412	0.49	+0.5
1,519,994	+		Psest_1412	0.71	+0.2
1,519,994	+		Psest_1412	0.71	-0.8
1,519,994	+		Psest_1412	0.71	+0.3
1,520,035	+		Psest_1412	0.74	-0.5
1,520,036	-		Psest_1412	0.74	+0.5
1,520,036	-		Psest_1412	0.74	+0.5
1,520,036	-		Psest_1412	0.74	+0.5
1,520,036	-		Psest_1412	0.74	+0.2
1,520,042	+		Psest_1412	0.75	+0.4
1,520,043	-		Psest_1412	0.75	+1.5
1,520,043	-		Psest_1412	0.75	+0.5
1,520,043	-		Psest_1412	0.75	+0.9
1,520,043	-		Psest_1412	0.75	+0.5
1,520,043	-		Psest_1412	0.75	+0.5
1,520,175	+		Psest_1412	0.86	-0.2
1,520,176	-		Psest_1412	0.86	-0.1
1,520,176	-		Psest_1412	0.86	+1.5
1,520,176	-		Psest_1412	0.86	-1.8
1,520,176	-		Psest_1412	0.86	+0.2
1,520,176	-		Psest_1412	0.86	-0.7
1,520,323	+				-0.9
1,520,323	+				+0.6
1,520,323	+				-1.0
1,520,324	-				-1.2
1,520,324	-				+0.9
1,520,324	-				-0.1
1,520,327	+				+1.3
1,520,328	-				-0.5
1,520,328	-				-0.1
1,520,552	+				-0.6
1,520,553	-				-1.1
1,520,553	-				+2.5
1,520,553	-				+1.1
1,520,572	+				-0.1
1,520,572	+				-0.3
1,520,572	+				-2.0
1,520,572	+				+0.5
1,520,572	+				+0.5
1,520,572	+				-3.1
1,520,572	+				-1.1
1,520,572	+				+1.1
1,520,572	+				+1.5
1,520,573	-				-1.1
1,520,573	-				+0.1
1,520,573	-				+0.0
1,520,573	-				-0.8
1,520,573	-				+0.5
1,520,573	-				-1.5
1,520,573	-				-1.0
1,520,624	+				-0.3
1,520,624	+				-0.7
1,520,624	+				-0.5
1,520,749	+				+0.5
1,520,749	+				+0.3
1,520,750	-				+0.5
1,520,750	-				-1.8
1,520,750	-				-1.5
1,520,750	-				-0.8
1,520,884	+		Psest_1413	0.15	-2.3
1,520,884	+		Psest_1413	0.15	-3.4
1,520,884	+		Psest_1413	0.15	-1.1
1,520,885	-		Psest_1413	0.15	-0.4
1,520,885	-		Psest_1413	0.15	-0.8
1,520,885	-		Psest_1413	0.15	+0.2
1,520,953	+		Psest_1413	0.19	-0.9
1,520,953	+		Psest_1413	0.19	+0.5
1,520,953	+		Psest_1413	0.19	-2.3
1,520,953	+		Psest_1413	0.19	+0.6
1,520,953	+		Psest_1413	0.19	+0.2
1,520,953	+		Psest_1413	0.19	-0.5
1,520,953	+		Psest_1413	0.19	-0.3
1,520,953	+		Psest_1413	0.19	+0.5
1,520,953	+		Psest_1413	0.19	-0.3
1,520,954	-		Psest_1413	0.19	-0.6
1,520,954	-		Psest_1413	0.19	+0.1
1,521,146	-		Psest_1413	0.30	+0.5
1,521,196	+		Psest_1413	0.33	-0.4
1,521,197	-		Psest_1413	0.33	-1.1
1,521,197	-		Psest_1413	0.33	-1.7
1,521,289	+		Psest_1413	0.39	-0.4
1,521,289	+		Psest_1413	0.39	+3.1
1,521,289	+		Psest_1413	0.39	-0.8
1,521,289	+		Psest_1413	0.39	-1.2
1,521,289	+		Psest_1413	0.39	-0.1
1,521,289	+		Psest_1413	0.39	+0.3
1,521,290	-		Psest_1413	0.39	+2.5
1,521,290	-		Psest_1413	0.39	-0.8
1,521,298	-		Psest_1413	0.39	+1.5