Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0108

Experiment: Def A22 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def A22 0.015 mg/ml
105,621	-		Psest_0106	0.72	+0.9
105,635	+		Psest_0106	0.74	+0.8
105,635	+		Psest_0106	0.74	+1.3
105,636	-		Psest_0106	0.74	+0.2
105,636	-		Psest_0106	0.74	+0.9
105,636	-		Psest_0106	0.74	+0.3
105,636	-		Psest_0106	0.74	+0.7
105,636	-		Psest_0106	0.74	-0.7
105,908	+				+0.9
105,908	+				+0.2
105,908	+				-0.4
105,909	-				+1.9
105,909	-				+1.2
105,909	-				+0.7
105,909	-				+1.2
106,230	-		Psest_0107	0.52	+0.9
106,765	+		Psest_0108	0.26	-0.7
106,765	+		Psest_0108	0.26	-0.0
106,765	+		Psest_0108	0.26	-0.7
106,765	+		Psest_0108	0.26	-0.7
106,765	+		Psest_0108	0.26	+0.1
106,765	+		Psest_0108	0.26	+0.1
106,765	+		Psest_0108	0.26	+1.9
106,765	+		Psest_0108	0.26	-0.5
106,766	-		Psest_0108	0.26	+1.9
106,766	-		Psest_0108	0.26	+3.5
106,766	-		Psest_0108	0.26	+0.6
106,766	-		Psest_0108	0.26	+0.6
106,766	-		Psest_0108	0.26	+1.2
106,792	+		Psest_0108	0.29	+0.9
106,792	+		Psest_0108	0.29	-0.9
106,792	+		Psest_0108	0.29	+0.9
106,826	-		Psest_0108	0.32	+2.9
106,826	-		Psest_0108	0.32	+1.9
106,826	-		Psest_0108	0.32	+0.9
106,879	+		Psest_0108	0.38	-0.1
106,966	+		Psest_0108	0.48	+2.2
106,977	+		Psest_0108	0.49	+2.5
106,977	+		Psest_0108	0.49	+1.3
107,180	-		Psest_0108	0.71	+0.3
107,309	+		Psest_0108	0.85	-0.5
107,373	+				+0.9
107,449	+				-0.8
107,514	+				+0.3
107,514	+				-0.3
107,514	+				-0.6
107,514	+				+0.6
107,515	-				+0.1
107,515	-				+1.3
107,515	-				+0.9
107,515	-				-1.4
107,515	-				+2.9
107,515	-				+0.6
107,720	+		Psest_0109	0.34	+1.2
107,720	+		Psest_0109	0.34	+0.3
107,720	+		Psest_0109	0.34	+0.6
107,720	+		Psest_0109	0.34	+0.0
107,786	+		Psest_0109	0.50	-0.1
107,786	+		Psest_0109	0.50	-0.4
107,786	+		Psest_0109	0.50	+0.1
107,786	+		Psest_0109	0.50	+0.1
107,786	+		Psest_0109	0.50	+0.3
107,786	+		Psest_0109	0.50	+0.7
107,786	+		Psest_0109	0.50	-1.3
107,786	+		Psest_0109	0.50	-1.3
107,786	+		Psest_0109	0.50	-0.3
107,786	+		Psest_0109	0.50	-0.9
107,786	+		Psest_0109	0.50	-0.8
107,787	-		Psest_0109	0.50	+0.1
107,787	-		Psest_0109	0.50	-0.6
107,787	-		Psest_0109	0.50	-1.1
107,787	-		Psest_0109	0.50	-0.7
107,787	-		Psest_0109	0.50	+2.5
107,787	-		Psest_0109	0.50	+0.3
107,787	-		Psest_0109	0.50	+0.2
107,787	-		Psest_0109	0.50	+0.3
107,828	+		Psest_0109	0.60	+0.2
108,007	+				+0.3
108,007	+				-0.8
108,007	+				+1.3
108,007	+				+2.9
108,007	+				+1.5
108,007	+				+0.4
108,007	+				-0.1
108,008	-				-0.7
108,008	-				-0.9
108,008	-				+0.9
108,008	-				-1.7
108,038	-				+0.9
108,089	-		Psest_0110	0.11	-0.1
108,089	-		Psest_0110	0.11	-0.3
108,166	+		Psest_0110	0.21	+0.8
108,166	+		Psest_0110	0.21	+0.9
108,166	+		Psest_0110	0.21	-0.1
108,166	+		Psest_0110	0.21	+0.3
108,166	+		Psest_0110	0.21	-0.9
108,166	+		Psest_0110	0.21	-2.0
108,166	+		Psest_0110	0.21	+0.9
108,166	+		Psest_0110	0.21	+1.2
108,166	+		Psest_0110	0.21	-0.4
108,166	+		Psest_0110	0.21	+0.9
108,166	+		Psest_0110	0.21	+0.4
108,166	+		Psest_0110	0.21	+0.5
108,166	+		Psest_0110	0.21	-1.1
108,166	+		Psest_0110	0.21	+0.4
108,166	+		Psest_0110	0.21	-0.7
108,166	+		Psest_0110	0.21	-1.0
108,167	-		Psest_0110	0.21	-0.2
108,167	-		Psest_0110	0.21	+2.9
108,167	-		Psest_0110	0.21	+1.5
108,167	-		Psest_0110	0.21	+1.9
108,167	-		Psest_0110	0.21	-2.5
108,167	-		Psest_0110	0.21	+1.9
108,167	-		Psest_0110	0.21	+0.0
108,167	-		Psest_0110	0.21	+1.3
108,167	-		Psest_0110	0.21	-0.6
108,167	-		Psest_0110	0.21	+1.5
108,167	-		Psest_0110	0.21	-0.7
108,167	-		Psest_0110	0.21	-0.4
108,167	-		Psest_0110	0.21	+0.3
108,167	-		Psest_0110	0.21	-0.3
108,167	-		Psest_0110	0.21	+0.9
108,167	-		Psest_0110	0.21	-0.1
108,167	-		Psest_0110	0.21	+0.6
108,167	-		Psest_0110	0.21	-0.4
108,167	-		Psest_0110	0.21	-0.7
108,398	-		Psest_0110	0.52	+0.6
108,445	+		Psest_0110	0.58	-1.2
108,445	+		Psest_0110	0.58	+0.9
108,445	+		Psest_0110	0.58	+0.1
108,445	+		Psest_0110	0.58	+0.7
108,445	+		Psest_0110	0.58	+0.3
108,445	+		Psest_0110	0.58	+1.2
108,445	+		Psest_0110	0.58	+0.2
108,445	+		Psest_0110	0.58	-0.1
108,445	+		Psest_0110	0.58	-0.7
108,446	-		Psest_0110	0.58	-1.0
108,446	-		Psest_0110	0.58	+0.9
108,446	-		Psest_0110	0.58	+0.3
108,446	-		Psest_0110	0.58	+0.1
108,446	-		Psest_0110	0.58	-1.4
108,446	-		Psest_0110	0.58	-0.9