Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1070

Experiment: Def A22 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def A22 0.015 mg/ml
1,157,305	+		Psest_1069	0.56	-0.4
1,157,305	+		Psest_1069	0.56	+0.3
1,157,306	-		Psest_1069	0.56	-0.2
1,157,306	-		Psest_1069	0.56	-0.5
1,157,401	+		Psest_1069	0.62	+0.7
1,157,402	-		Psest_1069	0.62	-0.6
1,157,485	+		Psest_1069	0.66	-0.1
1,157,486	-		Psest_1069	0.66	-1.4
1,157,572	+		Psest_1069	0.71	+0.5
1,157,617	-		Psest_1069	0.73	-0.8
1,157,650	+		Psest_1069	0.75	+0.5
1,157,976	-				+0.2
1,158,125	+				+1.5
1,158,125	+				+0.2
1,158,126	-				-0.8
1,158,238	+				+0.7
1,158,246	+				-1.0
1,158,246	+				+0.6
1,158,246	+				-0.0
1,158,247	-				+1.5
1,158,247	-				-0.1
1,158,247	-				+0.5
1,158,247	-				+1.5
1,158,247	-				-0.6
1,158,447	+		Psest_1070	0.51	-0.5
1,158,447	+		Psest_1070	0.51	-1.5
1,158,448	-		Psest_1070	0.51	-1.7
1,158,493	-		Psest_1070	0.62	-1.4
1,158,567	-		Psest_1070	0.81	+0.6
1,158,694	+				-1.1
1,158,695	-				-1.5
1,158,695	-				+0.0
1,158,695	-				-0.5
1,158,695	-				+2.1
1,158,695	-				-0.6
1,158,748	-				-0.7
1,158,792	+				-2.1
1,158,793	-				-0.5
1,158,793	-				+1.2
1,158,978	+		Psest_1071	0.15	-0.1
1,158,978	+		Psest_1071	0.15	-0.1
1,158,979	-		Psest_1071	0.15	-0.8
1,159,040	+		Psest_1071	0.19	+0.5
1,159,041	-		Psest_1071	0.19	-0.1
1,159,041	-		Psest_1071	0.19	-1.5
1,159,041	-		Psest_1071	0.19	+0.2
1,159,272	+		Psest_1071	0.34	-0.3
1,159,272	+		Psest_1071	0.34	-0.1
1,159,275	+		Psest_1071	0.35	+0.3
1,159,275	+		Psest_1071	0.35	+2.1
1,159,275	+		Psest_1071	0.35	-1.3
1,159,276	-		Psest_1071	0.35	-0.3
1,159,276	-		Psest_1071	0.35	+1.5
1,159,403	+		Psest_1071	0.43	+1.5