Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1557

Experiment: Def Cephalothin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Cephalothin 0.08 mg/ml
1,655,861	+				-0.4
1,655,898	+				-0.2
1,655,899	-				+0.1
1,655,972	+				-0.7
1,655,972	+				-0.3
1,656,324	+		Psest_1556	0.60	+0.6
1,656,395	+		Psest_1556	0.81	+0.5
1,656,395	+		Psest_1556	0.81	+0.3
1,656,395	+		Psest_1556	0.81	+0.1
1,656,396	-		Psest_1556	0.81	-0.1
1,656,396	-		Psest_1556	0.81	+1.6
1,656,396	-		Psest_1556	0.81	+0.3
1,656,396	-		Psest_1556	0.81	+0.5
1,656,466	+				-1.6
1,656,467	-				-0.7
1,656,467	-				-0.1
1,656,467	-				-0.4
1,656,467	-				-1.2
1,656,504	-				-0.5
1,656,582	+				+0.8
1,656,582	+				+0.2
1,656,653	+				+0.4
1,656,654	-				+0.5
1,656,654	-				-2.8
1,656,654	-				+0.7
1,656,750	+				+1.1
1,656,750	+				+0.6
1,656,750	+				+1.2
1,656,750	+				-1.9
1,656,750	+				-0.1
1,656,751	-				-3.3
1,656,751	-				-1.7
1,656,751	-				+0.3
1,656,751	-				-0.9
1,656,751	-				-0.2
1,656,751	-				+0.2
1,656,751	-				-1.3
1,656,751	-				+0.6
1,656,751	-				-2.4
1,656,965	-				-1.4
1,656,977	+		Psest_1557	0.10	-0.6
1,656,978	-		Psest_1557	0.10	+0.8
1,657,172	+		Psest_1557	0.17	-1.2
1,657,173	-		Psest_1557	0.17	-1.7
1,657,173	-		Psest_1557	0.17	-0.9
1,657,429	-		Psest_1557	0.27	+0.2
1,657,525	-		Psest_1557	0.31	+0.3
1,657,525	-		Psest_1557	0.31	-1.9
1,657,557	-		Psest_1557	0.32	+0.8
1,657,946	+		Psest_1557	0.47	-0.5
1,657,964	+		Psest_1557	0.47	+0.6
1,658,126	+		Psest_1557	0.54	+0.4
1,658,126	+		Psest_1557	0.54	-1.6
1,658,126	+		Psest_1557	0.54	-0.2
1,658,127	-		Psest_1557	0.54	+0.1
1,658,127	-		Psest_1557	0.54	-0.3
1,658,127	-		Psest_1557	0.54	+0.7
1,658,161	-		Psest_1557	0.55	-2.2
1,658,161	-		Psest_1557	0.55	-0.4
1,658,384	+		Psest_1557	0.63	+0.4
1,658,612	+		Psest_1557	0.72	-1.2
1,658,612	+		Psest_1557	0.72	-0.5
1,658,613	-		Psest_1557	0.72	-0.1
1,658,753	+		Psest_1557	0.77	-1.1
1,658,754	-		Psest_1557	0.77	+0.7
1,659,069	+		Psest_1557	0.89	-0.7
1,659,070	-		Psest_1557	0.89	-0.1
1,659,135	+				-2.0
1,659,208	+				+2.0
1,659,208	+				-0.2
1,659,208	+				-0.0
1,659,208	+				+0.6
1,659,208	+				-0.4
1,659,208	+				-1.0
1,659,209	-				-0.2
1,659,209	-				+0.3
1,659,212	+				-1.7
1,659,212	+				-1.9
1,659,212	+				-1.9
1,659,213	-				+1.4
1,659,213	-				-1.9
1,659,213	-				-0.8
1,659,213	-				+0.9
1,659,213	-				-0.4
1,659,341	-				+0.3
1,659,427	+				-1.6
1,659,427	+				-3.2
1,659,428	-				+0.2
1,659,428	-				+0.0
1,659,428	-				-0.3
1,659,576	+				-0.7