Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1401

Experiment: Def Cephalothin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Cephalothin 0.08 mg/ml
1,507,623	+		Psest_1399	0.87	+0.2
1,507,623	+		Psest_1399	0.87	-0.2
1,507,623	+		Psest_1399	0.87	-0.9
1,507,623	+		Psest_1399	0.87	-1.0
1,507,623	+		Psest_1399	0.87	+3.6
1,507,624	-		Psest_1399	0.87	+0.0
1,507,624	-		Psest_1399	0.87	-0.1
1,507,624	-		Psest_1399	0.87	-0.7
1,507,624	-		Psest_1399	0.87	+0.8
1,507,624	-		Psest_1399	0.87	-0.8
1,507,624	-		Psest_1399	0.87	-1.2
1,507,627	+		Psest_1399	0.88	-1.6
1,507,627	+		Psest_1399	0.88	-0.4
1,507,627	+		Psest_1399	0.88	+0.0
1,507,627	+		Psest_1399	0.88	-2.7
1,507,627	+		Psest_1399	0.88	+0.9
1,507,627	+		Psest_1399	0.88	-2.5
1,507,627	+		Psest_1399	0.88	-0.6
1,507,628	-		Psest_1399	0.88	-0.4
1,507,628	-		Psest_1399	0.88	+0.6
1,507,628	-		Psest_1399	0.88	-1.0
1,507,628	-		Psest_1399	0.88	-1.6
1,507,628	-		Psest_1399	0.88	-0.6
1,507,628	-		Psest_1399	0.88	-1.0
1,507,791	+				+2.6
1,507,980	+		Psest_1400	0.24	+0.2
1,507,980	+		Psest_1400	0.24	-0.4
1,507,980	+		Psest_1400	0.24	-0.5
1,507,981	-		Psest_1400	0.24	-0.8
1,507,981	-		Psest_1400	0.24	-0.3
1,507,981	-		Psest_1400	0.24	+1.6
1,508,259	+		Psest_1400	0.61	+0.7
1,508,259	+		Psest_1400	0.61	-0.1
1,508,259	+		Psest_1400	0.61	-0.8
1,508,286	+		Psest_1400	0.65	-1.0
1,508,286	+		Psest_1400	0.65	-0.3
1,508,287	-		Psest_1400	0.65	-1.6
1,508,287	-		Psest_1400	0.65	+0.0
1,508,287	-		Psest_1400	0.65	+0.8
1,508,287	-		Psest_1400	0.65	+0.0
1,508,287	-		Psest_1400	0.65	-0.7
1,508,388	+		Psest_1400	0.79	-1.7
1,508,388	+		Psest_1400	0.79	+0.2
1,508,389	-		Psest_1400	0.79	+1.2
1,508,548	+				-0.9
1,508,548	+				+0.9
1,508,548	+				-0.3
1,508,548	+				-0.8
1,508,548	+				+0.2
1,508,549	-				-0.8
1,508,549	-				+0.0
1,508,549	-				-0.3
1,508,684	+		Psest_1401	0.15	-2.1
1,508,685	-		Psest_1401	0.15	+2.0
1,508,685	-		Psest_1401	0.15	+1.0
1,508,685	-		Psest_1401	0.15	-0.4
1,508,721	+		Psest_1401	0.18	+0.1
1,508,722	-		Psest_1401	0.18	-1.2
1,508,782	+		Psest_1401	0.25	-0.4
1,508,782	+		Psest_1401	0.25	+0.1
1,508,782	+		Psest_1401	0.25	+0.2
1,508,782	+		Psest_1401	0.25	+0.8
1,508,782	+		Psest_1401	0.25	-0.2
1,508,782	+		Psest_1401	0.25	-0.2
1,508,782	+		Psest_1401	0.25	+1.1
1,508,782	+		Psest_1401	0.25	-1.8
1,508,782	+		Psest_1401	0.25	+0.6
1,508,782	+		Psest_1401	0.25	+0.2
1,508,782	+		Psest_1401	0.25	+0.0
1,508,782	+		Psest_1401	0.25	+0.9
1,508,782	+		Psest_1401	0.25	+0.2
1,508,782	+		Psest_1401	0.25	-0.5
1,508,782	+		Psest_1401	0.25	-0.1
1,508,782	+		Psest_1401	0.25	-1.4
1,508,782	+		Psest_1401	0.25	-0.4
1,508,782	+		Psest_1401	0.25	-2.0
1,508,783	-		Psest_1401	0.25	+2.6
1,508,783	-		Psest_1401	0.25	-0.3
1,508,783	-		Psest_1401	0.25	-1.1
1,508,783	-		Psest_1401	0.25	-1.7
1,508,783	-		Psest_1401	0.25	-1.2
1,508,783	-		Psest_1401	0.25	-0.6
1,508,783	-		Psest_1401	0.25	-1.2
1,508,783	-		Psest_1401	0.25	-1.0
1,508,783	-		Psest_1401	0.25	-1.2
1,508,783	-		Psest_1401	0.25	-1.4
1,508,783	-		Psest_1401	0.25	-2.1
1,508,783	-		Psest_1401	0.25	+0.7
1,508,783	-		Psest_1401	0.25	-1.3
1,509,184	+		Psest_1401	0.66	+0.0
1,509,184	+		Psest_1401	0.66	+0.1
1,509,184	+		Psest_1401	0.66	+0.1
1,509,184	+		Psest_1401	0.66	-1.1
1,509,185	-		Psest_1401	0.66	-3.5
1,509,185	-		Psest_1401	0.66	-1.1
1,509,185	-		Psest_1401	0.66	-2.4
1,509,185	-		Psest_1401	0.66	+0.9
1,509,185	-		Psest_1401	0.66	-0.3
1,509,185	-		Psest_1401	0.66	-2.3
1,509,185	-		Psest_1401	0.66	-0.4
1,509,185	-		Psest_1401	0.66	-1.6
1,509,185	-		Psest_1401	0.66	-0.8
1,509,185	-		Psest_1401	0.66	-3.2
1,509,247	+		Psest_1401	0.72	+2.8
1,509,569	+				+0.7
1,509,569	+				+0.6
1,509,569	+				-1.4
1,509,642	-				+0.3
1,509,642	-				-1.0
1,509,734	+				-1.2
1,509,735	-				+0.6
1,509,735	-				-0.8
1,510,004	+		Psest_1402	0.30	+0.0
1,510,004	+		Psest_1402	0.30	-0.3
1,510,004	+		Psest_1402	0.30	-0.4
1,510,004	+		Psest_1402	0.30	-0.7
1,510,005	-		Psest_1402	0.30	+0.1
1,510,005	-		Psest_1402	0.30	+1.6
1,510,005	-		Psest_1402	0.30	+0.7
1,510,005	-		Psest_1402	0.30	-0.2
1,510,035	+		Psest_1402	0.35	+0.3
1,510,035	+		Psest_1402	0.35	-2.3
1,510,035	+		Psest_1402	0.35	-0.1
1,510,035	+		Psest_1402	0.35	+0.3
1,510,035	+		Psest_1402	0.35	+0.0
1,510,036	-		Psest_1402	0.35	+0.4
1,510,036	-		Psest_1402	0.35	-1.0
1,510,036	-		Psest_1402	0.35	+0.5
1,510,036	-		Psest_1402	0.35	+0.9
1,510,036	-		Psest_1402	0.35	+0.2
1,510,036	-		Psest_1402	0.35	-0.7
1,510,036	-		Psest_1402	0.35	-1.0
1,510,103	+		Psest_1402	0.46	-1.0
1,510,103	+		Psest_1402	0.46	-0.4
1,510,103	+		Psest_1402	0.46	+2.3
1,510,103	+		Psest_1402	0.46	-0.5
1,510,103	+		Psest_1402	0.46	-0.5
1,510,104	-		Psest_1402	0.46	+2.2
1,510,104	-		Psest_1402	0.46	-1.3
1,510,104	-		Psest_1402	0.46	+0.7
1,510,104	-		Psest_1402	0.46	-1.4
1,510,130	+		Psest_1402	0.50	-1.1
1,510,131	-		Psest_1402	0.50	-1.1
1,510,131	-		Psest_1402	0.50	-1.4
1,510,131	-		Psest_1402	0.50	+0.1
1,510,183	+		Psest_1402	0.59	+1.4
1,510,184	-		Psest_1402	0.59	+1.6
1,510,184	-		Psest_1402	0.59	-0.6
1,510,184	-		Psest_1402	0.59	+0.0
1,510,185	+		Psest_1402	0.59	-1.7
1,510,185	+		Psest_1402	0.59	-1.5
1,510,185	+		Psest_1402	0.59	+0.1
1,510,186	-		Psest_1402	0.59	-0.9
1,510,436	+				-0.7
1,510,436	+				+0.4
1,510,436	+				-0.5
1,510,436	+				+0.6
1,510,436	+				+0.9
1,510,437	-				+0.4
1,510,437	-				+0.6
1,510,437	-				-0.7
1,510,437	-				-0.8
1,510,437	-				+0.0