Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1213

Experiment: Def Cephalothin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Cephalothin 0.08 mg/ml
1,317,530	+		Psest_1212	0.11	-1.1
1,317,531	-		Psest_1212	0.12	-0.3
1,317,531	-		Psest_1212	0.12	-2.4
1,317,689	+		Psest_1212	0.28	-1.6
1,317,689	+		Psest_1212	0.28	+0.8
1,317,689	+		Psest_1212	0.28	-0.7
1,317,689	+		Psest_1212	0.28	+0.5
1,317,689	+		Psest_1212	0.28	+0.0
1,317,689	+		Psest_1212	0.28	-1.7
1,317,689	+		Psest_1212	0.28	-1.4
1,317,689	+		Psest_1212	0.28	+0.3
1,317,689	+		Psest_1212	0.28	+0.4
1,317,689	+		Psest_1212	0.28	+0.7
1,317,689	+		Psest_1212	0.28	+1.6
1,317,689	+		Psest_1212	0.28	-0.2
1,317,689	+		Psest_1212	0.28	-2.1
1,317,689	+		Psest_1212	0.28	-0.4
1,317,689	+		Psest_1212	0.28	-0.7
1,317,689	+		Psest_1212	0.28	+2.2
1,317,689	+		Psest_1212	0.28	+0.4
1,317,689	+		Psest_1212	0.28	-0.2
1,317,689	+		Psest_1212	0.28	-0.4
1,317,690	-		Psest_1212	0.28	-1.7
1,317,690	-		Psest_1212	0.28	-2.3
1,317,690	-		Psest_1212	0.28	+0.6
1,317,690	-		Psest_1212	0.28	-0.7
1,317,690	-		Psest_1212	0.28	+0.4
1,317,690	-		Psest_1212	0.28	+0.5
1,317,690	-		Psest_1212	0.28	-0.4
1,317,690	-		Psest_1212	0.28	+1.9
1,317,690	-		Psest_1212	0.28	-2.1
1,317,690	-		Psest_1212	0.28	-0.4
1,317,690	-		Psest_1212	0.28	+0.3
1,317,690	-		Psest_1212	0.28	+0.3
1,317,690	-		Psest_1212	0.28	+0.9
1,317,690	-		Psest_1212	0.28	-0.3
1,317,690	-		Psest_1212	0.28	-2.4
1,317,690	-		Psest_1212	0.28	+0.5
1,317,690	-		Psest_1212	0.28	+2.0
1,317,690	-		Psest_1212	0.28	-0.4
1,317,690	-		Psest_1212	0.28	-1.7
1,317,690	-		Psest_1212	0.28	+0.0
1,317,690	-		Psest_1212	0.28	-0.7
1,317,690	-		Psest_1212	0.28	-1.4
1,317,690	-		Psest_1212	0.28	-0.5
1,317,767	+		Psest_1212	0.36	+1.6
1,317,768	-		Psest_1212	0.36	+0.4
1,317,789	-		Psest_1212	0.38	+0.0
1,318,052	-		Psest_1212	0.65	-0.7
1,318,074	+		Psest_1212	0.67	+0.2
1,318,075	-		Psest_1212	0.67	+0.3
1,318,280	+		Psest_1212	0.88	+0.0
1,318,280	+		Psest_1212	0.88	+0.9
1,318,281	-		Psest_1212	0.89	+1.3
1,318,281	-		Psest_1212	0.89	-0.9
1,318,281	-		Psest_1212	0.89	+1.3
1,318,281	-		Psest_1212	0.89	-0.7
1,318,355	+				-0.2
1,318,355	+				+1.1
1,318,355	+				+0.0
1,318,355	+				+0.3
1,318,355	+				-0.4
1,318,355	+				-0.7
1,318,355	+				-1.5
1,318,356	-				-0.5
1,318,356	-				+0.2
1,318,356	-				+0.4
1,318,356	-				-1.1
1,318,356	-				-0.9
1,318,531	+				-0.1
1,318,531	+				+0.0
1,318,531	+				+0.6
1,318,531	+				+1.0
1,318,564	+				+0.9
1,318,565	-				-0.7
1,318,565	-				-1.1
1,318,565	-				-1.0
1,318,565	-				-0.9
1,318,565	-				-0.3
1,318,567	+				-0.5
1,318,567	+				+0.0
1,318,567	+				-0.7
1,318,567	+				-1.4
1,318,567	+				+0.5
1,318,568	-				-2.3
1,318,568	-				+0.0
1,318,568	-				+3.2
1,318,568	-				-1.2
1,318,568	-				-0.2
1,318,826	-		Psest_1213	0.27	+1.6
1,318,826	-		Psest_1213	0.27	+1.0
1,318,910	-		Psest_1213	0.35	-1.6
1,319,071	+		Psest_1213	0.50	-1.2
1,319,071	+		Psest_1213	0.50	-3.0
1,319,071	+		Psest_1213	0.50	-0.4
1,319,072	-		Psest_1213	0.50	+0.5
1,319,072	-		Psest_1213	0.50	-1.0
1,319,072	-		Psest_1213	0.50	-1.7
1,319,072	-		Psest_1213	0.50	+0.4
1,319,072	-		Psest_1213	0.50	-0.3
1,319,072	-		Psest_1213	0.50	-1.2
1,319,204	-		Psest_1213	0.62	-1.6
1,319,218	+		Psest_1213	0.63	-1.5
1,319,219	-		Psest_1213	0.63	-0.4
1,319,219	-		Psest_1213	0.63	+1.6
1,319,219	-		Psest_1213	0.63	+0.4
1,319,219	-		Psest_1213	0.63	+0.0
1,319,219	-		Psest_1213	0.63	-2.2
1,319,219	-		Psest_1213	0.63	+0.1
1,319,311	+		Psest_1213	0.72	+0.6
1,319,312	-		Psest_1213	0.72	+1.0
1,319,312	-		Psest_1213	0.72	+1.3
1,319,312	-		Psest_1213	0.72	+1.0
1,319,342	-		Psest_1213	0.74	+1.1
1,319,446	+		Psest_1213	0.84	+0.6
1,319,446	+		Psest_1213	0.84	-1.2
1,319,446	+		Psest_1213	0.84	+0.0
1,319,446	+		Psest_1213	0.84	-1.9
1,319,447	-		Psest_1213	0.84	-0.4
1,319,447	-		Psest_1213	0.84	+0.6
1,319,447	-		Psest_1213	0.84	-1.0
1,319,447	-		Psest_1213	0.84	-0.3
1,319,447	-		Psest_1213	0.84	+1.6
1,319,447	-		Psest_1213	0.84	-0.6
1,319,503	+		Psest_1213	0.89	+0.3
1,319,503	+		Psest_1213	0.89	-1.0
1,319,503	+		Psest_1213	0.89	-1.7
1,319,503	+		Psest_1213	0.89	+0.6
1,319,504	-		Psest_1213	0.89	-0.4
1,319,504	-		Psest_1213	0.89	+0.2
1,319,504	-		Psest_1213	0.89	-0.4
1,319,645	+				-1.6
1,319,645	+				-0.3
1,319,646	-				+0.6
1,319,650	-				+0.1
1,319,650	-				-1.7
1,319,670	+				-0.7
1,319,670	+				+2.2
1,319,671	-				+0.7
1,319,671	-				+0.0
1,319,705	+				-0.1
1,319,706	-				-0.9
1,319,706	-				-1.4
1,319,706	-				+0.2
1,320,261	+		Psest_1214	0.32	+0.1
1,320,261	+		Psest_1214	0.32	-1.3
1,320,413	+		Psest_1214	0.43	-0.4
1,320,413	+		Psest_1214	0.43	+0.3
1,320,483	+		Psest_1214	0.49	-0.5
1,320,484	-		Psest_1214	0.49	-0.7
1,320,493	+		Psest_1214	0.49	+0.4
1,320,493	+		Psest_1214	0.49	-1.2
1,320,526	-		Psest_1214	0.52	-0.6
1,320,526	-		Psest_1214	0.52	+0.0
1,320,526	-		Psest_1214	0.52	+1.9
1,320,526	-		Psest_1214	0.52	-1.4
1,320,526	-		Psest_1214	0.52	-2.1