Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1080

Experiment: Def Cephalothin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Cephalothin 0.08 mg/ml
1,167,426	+		Psest_1079	0.12	+0.0
1,167,448	+		Psest_1079	0.14	-0.4
1,167,448	+		Psest_1079	0.14	+0.0
1,167,448	+		Psest_1079	0.14	-0.1
1,167,448	+		Psest_1079	0.14	+0.0
1,167,449	-		Psest_1079	0.15	-1.0
1,167,449	-		Psest_1079	0.15	-1.2
1,167,449	-		Psest_1079	0.15	+0.0
1,167,449	-		Psest_1079	0.15	+0.6
1,167,449	-				+2.2
1,167,449	-		Psest_1079	0.15	+0.3
1,167,559	+		Psest_1079	0.27	-0.3
1,167,559	+		Psest_1079	0.27	+0.0
1,167,559	+		Psest_1079	0.27	-0.4
1,167,559	+		Psest_1079	0.27	+0.0
1,167,559	+		Psest_1079	0.27	+0.0
1,167,560	-		Psest_1079	0.27	+1.6
1,167,560	-		Psest_1079	0.27	-0.2
1,167,560	-		Psest_1079	0.27	+0.0
1,167,719	-		Psest_1079	0.45	+0.0
1,167,989	-		Psest_1079	0.75	+0.0
1,168,088	-		Psest_1079	0.86	+0.6
1,168,217	+				-0.7
1,168,217	+				+2.2
1,168,217	+				-2.0
1,168,217	+				-1.0
1,168,217	+				-1.0
1,168,217	+				+0.6
1,168,217	+				-1.2
1,168,217	+				+0.9
1,168,218	-				+0.0
1,168,218	-				-0.7
1,168,218	-				+0.9
1,168,218	-				-0.7
1,168,218	-				+0.0
1,168,218	-				-0.4
1,168,218	-				-0.4
1,168,218	-				+0.6
1,168,218	-				+1.0
1,168,218	-				+2.2
1,168,218	-				+0.0
1,168,259	+				+0.6
1,168,259	+				+1.6
1,168,259	+				+0.6
1,168,259	+				-0.7
1,168,259	+				+0.6
1,168,259	+				+0.6
1,168,259	+				-0.4
1,168,259	+				-0.4
1,168,259	+				+0.0
1,168,259	+				-1.4
1,168,260	-				-0.4
1,168,260	-				+2.8
1,168,260	-				-1.7
1,168,260	-				-1.4
1,168,260	-				-0.7
1,168,260	-				+0.6
1,168,260	-				-1.7
1,168,260	-				-1.2
1,168,260	-				+0.0
1,168,338	+				-1.4
1,168,555	+				-2.4
1,168,676	+		Psest_1080	0.16	-1.2
1,168,677	-		Psest_1080	0.16	+2.0
1,168,856	-		Psest_1080	0.25	-0.1
1,168,915	+		Psest_1080	0.28	-1.7
1,168,915	+		Psest_1080	0.28	-1.4
1,168,915	+		Psest_1080	0.28	-2.4
1,168,916	-		Psest_1080	0.28	+0.0
1,169,135	+		Psest_1080	0.40	+0.3
1,169,210	+		Psest_1080	0.44	-1.1
1,169,212	+		Psest_1080	0.44	-1.8
1,169,212	+		Psest_1080	0.44	-0.4
1,169,212	+		Psest_1080	0.44	+0.6
1,169,212	+		Psest_1080	0.44	-0.7
1,169,212	+		Psest_1080	0.44	-0.7
1,169,212	+		Psest_1080	0.44	+0.3
1,169,212	+		Psest_1080	0.44	-1.5
1,169,212	+		Psest_1080	0.44	-1.3
1,169,212	+		Psest_1080	0.44	+0.6
1,169,212	+		Psest_1080	0.44	-2.0
1,169,212	+		Psest_1080	0.44	-2.5
1,169,213	-		Psest_1080	0.44	-1.4
1,169,213	-		Psest_1080	0.44	-0.7
1,169,213	-		Psest_1080	0.44	-2.5
1,169,265	-		Psest_1080	0.46	-1.8
1,169,541	+		Psest_1080	0.61	-1.4
1,169,541	+		Psest_1080	0.61	-1.5
1,169,542	-		Psest_1080	0.61	+1.2
1,169,615	+		Psest_1080	0.65	-2.8
1,169,616	-		Psest_1080	0.65	-1.0
1,169,678	+		Psest_1080	0.68	-2.0
1,169,678	+		Psest_1080	0.68	-2.8
1,169,678	+		Psest_1080	0.68	-1.1
1,169,678	+		Psest_1080	0.68	-1.7
1,169,679	-		Psest_1080	0.68	-2.9
1,169,679	-		Psest_1080	0.68	-1.8
1,169,679	-		Psest_1080	0.68	-0.2
1,169,679	-		Psest_1080	0.68	-0.7
1,169,679	-		Psest_1080	0.68	-2.4
1,170,104	+				-1.5
1,170,105	-				-1.0
1,170,105	-				-2.5
1,170,441	-		Psest_1081	0.27	-0.4
1,170,649	+		Psest_1081	0.61	-2.0
1,170,649	+		Psest_1081	0.61	-0.2
1,170,649	+		Psest_1081	0.61	-0.0
1,170,649	+		Psest_1081	0.61	-2.5
1,170,649	+		Psest_1081	0.61	-0.7
1,170,649	+		Psest_1081	0.61	-0.4
1,170,649	+		Psest_1081	0.61	-0.8
1,170,649	+		Psest_1081	0.61	+0.6
1,170,649	+		Psest_1081	0.61	+0.8
1,170,649	+		Psest_1081	0.61	-0.4
1,170,649	+		Psest_1081	0.61	-0.4
1,170,650	-		Psest_1081	0.61	-0.9
1,170,650	-		Psest_1081	0.61	-1.7
1,170,650	-		Psest_1081	0.61	+1.1
1,170,650	-		Psest_1081	0.61	+1.4
1,170,650	-		Psest_1081	0.61	-0.7
1,170,854	+				+0.0
1,170,854	+				-0.7
1,170,854	+				-1.4
1,170,854	+				-2.6
1,170,854	+				+0.3
1,170,854	+				-0.8
1,170,854	+				-0.2
1,170,854	+				-0.5
1,170,854	+				-2.5
1,170,854	+				-1.8
1,170,855	-				+0.0
1,170,855	-				-2.1
1,170,855	-				-0.4
1,170,855	-				+1.0
1,170,855	-				-0.3
1,170,855	-				+1.8
1,170,855	-				-0.4
1,170,855	-				+0.0
1,170,855	-				-0.8
1,170,855	-				-1.0
1,170,855	-				-1.0
1,170,855	-				-1.1
1,171,233	+		Psest_1082	0.43	-2.6
1,171,233	+		Psest_1082	0.43	+0.3
1,171,234	-		Psest_1082	0.43	+0.0