Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3481

Experiment: Def Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Cephalothin 0.04 mg/ml
3,649,817	+		Psest_3480	0.70	+2.3
3,649,817	+		Psest_3480	0.70	+1.6
3,649,896	-		Psest_3480	0.85	+0.6
3,649,896	-		Psest_3480	0.85	+1.6
3,650,053	+				-0.7
3,650,053	+				+0.3
3,650,053	+				+1.8
3,650,053	+				+1.2
3,650,054	-				+0.1
3,650,054	-				+2.4
3,650,054	-				+2.6
3,650,054	-				+0.9
3,650,054	-				-0.3
3,650,054	-				+0.1
3,650,054	-				+1.0
3,650,054	-				+1.6
3,650,054	-				+1.6
3,650,179	+				+0.6
3,650,515	+		Psest_3481	0.29	+0.8
3,650,515	+		Psest_3481	0.29	+1.5
3,650,516	-		Psest_3481	0.30	+1.4
3,650,583	+		Psest_3481	0.36	+0.5
3,650,584	-		Psest_3481	0.36	+0.3
3,650,584	-		Psest_3481	0.36	+0.7
3,650,584	-		Psest_3481	0.36	+0.2
3,650,584	-		Psest_3481	0.36	+1.6
3,650,584	-		Psest_3481	0.36	+1.1
3,650,584	-		Psest_3481	0.36	+0.6
3,650,584	-		Psest_3481	0.36	+2.2
3,650,584	-		Psest_3481	0.36	+1.6
3,650,584	-		Psest_3481	0.36	+1.8
3,650,584	-		Psest_3481	0.36	+0.1
3,650,995	-		Psest_3481	0.78	+1.2
3,651,127	+				+2.4
3,651,172	+				+0.8
3,651,201	+				+0.8
3,651,202	-				+0.9
3,651,202	-				+1.0
3,651,202	-				+0.6
3,651,227	+				+0.2
3,651,227	+				+1.6
3,651,227	+				+0.4
3,651,227	+				-0.4
3,651,227	+				+1.6
3,651,228	-				+0.8
3,651,457	+				+0.3
3,651,457	+				+0.9
3,651,457	+				+0.6
3,651,458	-				-0.7
3,651,520	-		Psest_3482	0.14	-0.2
3,651,887	-		Psest_3482	0.53	-1.2
3,651,887	-		Psest_3482	0.53	+0.6
3,651,887	-		Psest_3482	0.53	-0.7
3,651,887	-		Psest_3482	0.53	+0.6
3,651,887	-		Psest_3482	0.53	+2.4
3,651,889	+		Psest_3482	0.53	-3.0
3,651,890	-		Psest_3482	0.53	+1.6
3,651,890	-		Psest_3482	0.53	-0.7
3,651,890	-		Psest_3482	0.53	+1.3
3,652,026	+		Psest_3482	0.67	+0.5
3,652,026	+		Psest_3482	0.67	-0.7
3,652,027	-		Psest_3482	0.67	+2.6