Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1079

Experiment: Def Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Cephalothin 0.04 mg/ml
1,166,429	+		Psest_1077	0.83	+1.1
1,166,429	+		Psest_1077	0.83	-0.6
1,166,429	+		Psest_1077	0.83	+0.7
1,166,429	+		Psest_1077	0.83	+0.5
1,166,429	+		Psest_1077	0.83	+1.2
1,166,429	+		Psest_1077	0.83	+1.7
1,166,429	+		Psest_1077	0.83	-0.3
1,166,429	+		Psest_1077	0.83	+1.3
1,166,429	+		Psest_1077	0.83	-0.9
1,166,429	+		Psest_1077	0.83	+1.2
1,166,429	+		Psest_1077	0.83	+0.9
1,166,429	+		Psest_1077	0.83	+1.3
1,166,429	+		Psest_1077	0.83	-0.5
1,166,430	-		Psest_1077	0.84	+2.0
1,166,430	-		Psest_1077	0.84	+0.7
1,166,430	-		Psest_1077	0.84	+1.3
1,166,430	-		Psest_1077	0.84	-0.1
1,166,430	-		Psest_1077	0.84	-0.3
1,166,430	-		Psest_1077	0.84	-2.3
1,166,430	-		Psest_1077	0.84	-0.5
1,166,471	+				+1.4
1,166,471	+				+1.6
1,166,471	+				-0.3
1,166,472	-				-0.3
1,166,472	-				-1.1
1,166,604	+				+0.3
1,166,604	+				-0.7
1,166,604	+				-0.6
1,166,604	+				-0.1
1,166,604	+				+1.4
1,166,604	+				-0.1
1,166,604	+				-1.3
1,166,604	+				+0.3
1,166,604	+				+0.2
1,166,604	+				-0.6
1,166,604	+				+0.3
1,166,604	+				-0.5
1,166,604	+				+1.3
1,166,604	+				-1.6
1,166,604	+				+1.9
1,166,604	+				-0.6
1,166,604	+				+0.9
1,166,604	+				+0.3
1,166,604	+				+0.4
1,166,604	+				-1.0
1,166,604	+				-0.7
1,166,604	+				+0.2
1,166,604	+				+0.5
1,166,604	+				-2.5
1,166,604	+				-0.9
1,166,604	+				-0.1
1,166,605	-				-0.3
1,166,605	-				-0.3
1,166,605	-				+0.1
1,166,605	-				+0.7
1,166,605	-				-1.5
1,166,605	-				-0.6
1,166,605	-				+2.0
1,166,605	-				-0.8
1,166,605	-				+1.2
1,166,605	-				-0.9
1,166,605	-				+2.1
1,166,605	-				-0.5
1,166,605	-				-0.6
1,166,605	-				+0.4
1,166,605	-				+0.1
1,166,605	-				-1.3
1,166,605	-				-0.9
1,166,605	-				+0.8
1,166,605	-				-0.3
1,166,877	+		Psest_1078	0.49	-1.1
1,166,878	-		Psest_1078	0.49	+1.7
1,167,000	+		Psest_1078	0.67	+0.0
1,167,000	+		Psest_1078	0.67	+0.5
1,167,000	+		Psest_1078	0.67	+0.7
1,167,000	+		Psest_1078	0.67	+1.7
1,167,001	-		Psest_1078	0.67	-1.1
1,167,001	-		Psest_1078	0.67	+0.1
1,167,001	-		Psest_1078	0.67	-0.7
1,167,001	-		Psest_1078	0.67	+3.3
1,167,237	+				-0.2
1,167,237	+				-1.6
1,167,237	+				+2.2
1,167,237	+				+0.9
1,167,238	-				-0.6
1,167,238	-				+0.5
1,167,243	+				+1.2
1,167,243	+				-1.7
1,167,243	+				+0.9
1,167,243	+				+1.6
1,167,244	-				-2.0
1,167,244	-				+0.5
1,167,244	-				+1.3
1,167,244	-				+1.1
1,167,426	+		Psest_1079	0.12	+0.7
1,167,448	+		Psest_1079	0.14	-0.3
1,167,448	+		Psest_1079	0.14	+1.7
1,167,448	+		Psest_1079	0.14	-1.0
1,167,448	+		Psest_1079	0.14	-0.9
1,167,449	-		Psest_1079	0.15	-0.9
1,167,449	-		Psest_1079	0.15	+0.5
1,167,449	-		Psest_1079	0.15	+0.1
1,167,449	-		Psest_1079	0.15	+0.7
1,167,449	-				+0.7
1,167,449	-		Psest_1079	0.15	+1.0
1,167,559	+		Psest_1079	0.27	-0.2
1,167,559	+		Psest_1079	0.27	+1.1
1,167,559	+		Psest_1079	0.27	+1.3
1,167,559	+		Psest_1079	0.27	+0.1
1,167,559	+		Psest_1079	0.27	-0.9
1,167,560	-		Psest_1079	0.27	+0.7
1,167,560	-		Psest_1079	0.27	+0.5
1,167,560	-		Psest_1079	0.27	+1.1
1,167,719	-		Psest_1079	0.45	+0.1
1,167,989	-		Psest_1079	0.75	-0.9
1,168,088	-		Psest_1079	0.86	+0.7
1,168,217	+				+0.4
1,168,217	+				+2.3
1,168,217	+				-1.3
1,168,217	+				+1.1
1,168,217	+				-0.9
1,168,217	+				+0.7
1,168,217	+				-1.1
1,168,217	+				+1.4
1,168,218	-				+0.1
1,168,218	-				+1.0
1,168,218	-				+2.0
1,168,218	-				-0.6
1,168,218	-				+2.7
1,168,218	-				-0.3
1,168,218	-				-0.3
1,168,218	-				+4.3
1,168,218	-				+0.7
1,168,218	-				+1.7
1,168,218	-				+0.1
1,168,259	+				+2.3
1,168,259	+				+1.7
1,168,259	+				+1.7
1,168,259	+				+0.4
1,168,259	+				+3.3
1,168,259	+				-0.3
1,168,259	+				+0.4
1,168,259	+				-0.3
1,168,259	+				+0.1
1,168,259	+				-0.3
1,168,260	-				+0.7
1,168,260	-				+0.1
1,168,260	-				-0.6
1,168,260	-				+1.0
1,168,260	-				-1.6
1,168,260	-				+3.3
1,168,260	-				-1.6
1,168,260	-				+0.5
1,168,260	-				+2.7
1,168,338	+				+0.5
1,168,555	+				-1.3
1,168,676	+		Psest_1080	0.16	-0.1
1,168,677	-		Psest_1080	0.16	-0.9
1,168,856	-		Psest_1080	0.25	-0.6
1,168,915	+		Psest_1080	0.28	-0.6
1,168,915	+		Psest_1080	0.28	-0.3
1,168,915	+		Psest_1080	0.28	-2.3
1,168,916	-		Psest_1080	0.28	+0.1
1,169,135	+		Psest_1080	0.40	-1.6
1,169,210	+		Psest_1080	0.44	+0.3
1,169,212	+		Psest_1080	0.44	-3.3
1,169,212	+		Psest_1080	0.44	-1.3
1,169,212	+		Psest_1080	0.44	-0.3
1,169,212	+		Psest_1080	0.44	-2.2
1,169,212	+		Psest_1080	0.44	+1.4
1,169,212	+		Psest_1080	0.44	-0.6
1,169,212	+		Psest_1080	0.44	-0.5
1,169,212	+		Psest_1080	0.44	-2.2
1,169,212	+		Psest_1080	0.44	+0.7
1,169,212	+		Psest_1080	0.44	-1.9
1,169,212	+		Psest_1080	0.44	-3.4
1,169,213	-		Psest_1080	0.44	-1.3
1,169,213	-		Psest_1080	0.44	-2.2
1,169,213	-		Psest_1080	0.44	-2.4