Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1062

Experiment: Def Cephalothin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Def Cephalothin 0.04 mg/ml
1,150,710	+		Psest_1061	0.38	-2.0
1,150,711	-		Psest_1061	0.38	+1.2
1,150,711	-		Psest_1061	0.38	+1.7
1,150,714	-		Psest_1061	0.38	+0.4
1,150,764	+		Psest_1061	0.41	+1.4
1,150,764	+		Psest_1061	0.41	-0.2
1,150,764	+		Psest_1061	0.41	-0.2
1,150,764	+		Psest_1061	0.41	+0.1
1,150,765	-		Psest_1061	0.41	+0.9
1,150,765	-		Psest_1061	0.41	-0.9
1,150,765	-		Psest_1061	0.41	+1.5
1,150,765	-		Psest_1061	0.41	-0.2
1,150,765	-		Psest_1061	0.41	-0.6
1,150,765	-		Psest_1061	0.41	+0.9
1,150,765	-		Psest_1061	0.41	+0.5
1,150,765	-		Psest_1061	0.41	-0.1
1,150,893	+		Psest_1061	0.50	-2.6
1,150,894	-		Psest_1061	0.50	+1.4
1,151,094	+		Psest_1061	0.65	-1.3
1,151,094	+		Psest_1061	0.65	+0.3
1,151,094	+		Psest_1061	0.65	+1.5
1,151,094	+		Psest_1061	0.65	-0.1
1,151,094	+		Psest_1061	0.65	+1.3
1,151,178	+		Psest_1061	0.71	+0.3
1,151,178	+		Psest_1061	0.71	+1.9
1,151,179	-		Psest_1061	0.71	+2.1
1,151,193	+		Psest_1061	0.72	+1.7
1,151,193	+		Psest_1061	0.72	-0.4
1,151,194	-		Psest_1061	0.72	-1.1
1,151,194	-		Psest_1061	0.72	+0.8
1,151,194	-		Psest_1061	0.72	-0.5
1,151,194	-		Psest_1061	0.72	-1.1
1,151,286	+		Psest_1061	0.78	-0.6
1,151,286	+		Psest_1061	0.78	+1.4
1,151,287	-		Psest_1061	0.78	-0.3
1,151,287	-		Psest_1061	0.78	+0.0
1,151,287	-		Psest_1061	0.78	+0.9
1,151,641	+				-0.8
1,151,642	-				+1.7
1,151,672	+				+0.9
1,151,672	+				+0.8
1,151,672	+				-0.4
1,151,672	+				+0.0
1,151,672	+				-0.8
1,151,672	+				-1.3
1,151,672	+				+0.3
1,151,672	+				-0.8
1,151,672	+				+2.1
1,151,672	+				-1.1
1,151,672	+				-2.2
1,151,672	+				-2.6
1,151,673	-				+1.0
1,151,673	-				-1.5
1,151,673	-				-1.3
1,151,673	-				-0.0
1,151,673	-				+0.1
1,151,673	-				+1.3
1,151,673	-				-0.6
1,151,673	-				+0.1
1,151,783	+		Psest_1062	0.17	-0.0
1,152,053	+		Psest_1062	0.59	+0.7
1,152,053	+		Psest_1062	0.59	+0.3
1,152,054	-		Psest_1062	0.59	+0.4
1,152,054	-		Psest_1062	0.59	+0.4
1,152,054	-		Psest_1062	0.59	-0.9
1,152,054	-		Psest_1062	0.59	+0.9
1,152,054	-		Psest_1062	0.59	+0.2
1,152,057	-		Psest_1062	0.59	+4.5
1,152,218	+		Psest_1062	0.84	+0.3
1,152,219	-		Psest_1062	0.84	+1.1
1,152,219	-		Psest_1062	0.84	-0.3
1,152,219	-		Psest_1062	0.84	-0.7
1,152,219	-		Psest_1062	0.84	-0.3
1,152,406	+				-2.0
1,152,406	+				+1.3
1,152,406	+				+2.2
1,152,406	+				-0.9
1,152,406	+				-0.1
1,152,406	+				+1.3
1,152,406	+				-0.4
1,152,407	-				+0.0
1,152,407	-				+1.4
1,152,407	-				-1.5
1,152,407	-				+0.5
1,152,407	-				+1.1
1,152,407	-				+0.3
1,152,407	-				-2.2
1,152,407	-				-1.0
1,152,565	+		Psest_1063	0.27	+0.2
1,152,565	+		Psest_1063	0.27	+0.9
1,152,565	+		Psest_1063	0.27	+0.3
1,152,566	-		Psest_1063	0.27	-1.1
1,152,566	-		Psest_1063	0.27	-0.4
1,152,566	-		Psest_1063	0.27	+0.5
1,152,580	+		Psest_1063	0.29	+0.3
1,152,581	-		Psest_1063	0.29	+0.5
1,152,581	-		Psest_1063	0.29	+0.3
1,152,733	+		Psest_1063	0.46	+0.6
1,152,931	+		Psest_1063	0.68	-0.3
1,152,931	+		Psest_1063	0.68	-0.3
1,152,932	-		Psest_1063	0.68	-0.1
1,152,932	-		Psest_1063	0.68	+0.7
1,152,932	-		Psest_1063	0.68	-0.4
1,152,932	-		Psest_1063	0.68	+1.2
1,152,932	-		Psest_1063	0.68	+1.4
1,152,932	-		Psest_1063	0.68	-1.1
1,152,932	-		Psest_1063	0.68	-0.3
1,152,938	-		Psest_1063	0.69	+2.0
1,153,050	-		Psest_1063	0.81	+0.6
1,153,088	-		Psest_1063	0.85	+0.4
1,153,088	-		Psest_1063	0.85	-0.6
1,153,088	-		Psest_1063	0.85	-0.7
1,153,127	+		Psest_1063	0.90	+0.6
1,153,127	+		Psest_1063	0.90	-0.3
1,153,252	+				+0.3
1,153,279	+				+0.4
1,153,312	+				-0.2