Experiment: Def Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2335 and Psest_2336 are separated by 43 nucleotides Psest_2336 and Psest_2337 are separated by 11 nucleotides Psest_2337 and Psest_2338 overlap by 4 nucleotides
Psest_2335: Psest_2335 - hypothetical protein, at 2,488,758 to 2,489,039
_2335
Psest_2336: Psest_2336 - Lysophospholipase L1 and related esterases, at 2,489,083 to 2,489,688
_2336
Psest_2337: Psest_2337 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,489,700 to 2,490,386
_2337
Psest_2338: Psest_2338 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 2,490,383 to 2,492,887
_2338
Position (kb)
2489
2490
2491 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2488.734 kb on + strand at 2488.734 kb on + strand at 2488.760 kb on - strand at 2489.014 kb on + strand at 2489.067 kb on + strand at 2489.154 kb on + strand, within Psest_2336 at 2489.154 kb on + strand, within Psest_2336 at 2489.154 kb on + strand, within Psest_2336 at 2489.155 kb on - strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.213 kb on + strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.214 kb on - strand, within Psest_2336 at 2489.295 kb on + strand, within Psest_2336 at 2489.295 kb on + strand, within Psest_2336 at 2489.296 kb on - strand, within Psest_2336 at 2489.446 kb on + strand, within Psest_2336 at 2489.496 kb on + strand, within Psest_2336 at 2489.496 kb on + strand, within Psest_2336 at 2489.598 kb on + strand, within Psest_2336 at 2489.599 kb on - strand, within Psest_2336 at 2489.599 kb on - strand, within Psest_2336 at 2489.602 kb on - strand, within Psest_2336 at 2489.682 kb on + strand at 2489.682 kb on + strand at 2489.683 kb on - strand at 2489.683 kb on - strand at 2489.683 kb on - strand at 2489.683 kb on - strand at 2489.733 kb on - strand at 2489.788 kb on + strand, within Psest_2337 at 2489.789 kb on - strand, within Psest_2337 at 2490.190 kb on + strand, within Psest_2337 at 2490.190 kb on + strand, within Psest_2337 at 2490.190 kb on + strand, within Psest_2337 at 2490.191 kb on - strand, within Psest_2337 at 2490.191 kb on - strand, within Psest_2337 at 2490.191 kb on - strand, within Psest_2337 at 2490.282 kb on - strand, within Psest_2337 at 2490.582 kb on + strand at 2490.583 kb on - strand at 2490.770 kb on + strand, within Psest_2338 at 2490.770 kb on + strand, within Psest_2338 at 2490.912 kb on - strand, within Psest_2338 at 2490.938 kb on + strand, within Psest_2338 at 2490.938 kb on + strand, within Psest_2338 at 2490.938 kb on + strand, within Psest_2338 at 2490.938 kb on + strand, within Psest_2338 at 2490.938 kb on + strand, within Psest_2338 at 2490.938 kb on + strand, within Psest_2338 at 2490.938 kb on + strand, within Psest_2338 at 2490.939 kb on - strand, within Psest_2338 at 2490.939 kb on - strand, within Psest_2338 at 2490.939 kb on - strand, within Psest_2338 at 2490.939 kb on - strand, within Psest_2338 at 2490.939 kb on - strand, within Psest_2338 at 2490.941 kb on - strand, within Psest_2338 at 2491.305 kb on + strand, within Psest_2338 at 2491.305 kb on + strand, within Psest_2338 at 2491.305 kb on + strand, within Psest_2338 at 2491.305 kb on + strand, within Psest_2338 at 2491.306 kb on - strand, within Psest_2338 at 2491.306 kb on - strand, within Psest_2338 at 2491.306 kb on - strand, within Psest_2338 at 2491.306 kb on - strand, within Psest_2338 at 2491.306 kb on - strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.307 kb on + strand, within Psest_2338 at 2491.308 kb on - strand, within Psest_2338 at 2491.308 kb on - strand, within Psest_2338 at 2491.308 kb on - strand, within Psest_2338 at 2491.308 kb on - strand, within Psest_2338 at 2491.308 kb on - strand, within Psest_2338
Per-strain Table
Position Strand Gene LocusTag Fraction Def Vancomycin 0.016 mg/ml remove 2,488,734 + +1.4 2,488,734 + +2.8 2,488,760 - +0.5 2,489,014 + +2.6 2,489,067 + +1.8 2,489,154 + Psest_2336 0.12 +0.1 2,489,154 + Psest_2336 0.12 +1.2 2,489,154 + Psest_2336 0.12 +1.6 2,489,155 - Psest_2336 0.12 +0.6 2,489,213 + Psest_2336 0.21 +2.1 2,489,213 + Psest_2336 0.21 +1.1 2,489,213 + Psest_2336 0.21 +0.5 2,489,213 + Psest_2336 0.21 +1.2 2,489,213 + Psest_2336 0.21 +0.7 2,489,213 + Psest_2336 0.21 -0.9 2,489,213 + Psest_2336 0.21 +0.8 2,489,213 + Psest_2336 0.21 +0.8 2,489,213 + Psest_2336 0.21 +0.8 2,489,214 - Psest_2336 0.22 +2.5 2,489,214 - Psest_2336 0.22 +1.3 2,489,214 - Psest_2336 0.22 +0.9 2,489,214 - Psest_2336 0.22 +0.5 2,489,214 - Psest_2336 0.22 -0.7 2,489,214 - Psest_2336 0.22 -0.6 2,489,214 - Psest_2336 0.22 -0.7 2,489,214 - Psest_2336 0.22 +1.1 2,489,295 + Psest_2336 0.35 +0.6 2,489,295 + Psest_2336 0.35 -1.6 2,489,296 - Psest_2336 0.35 -0.3 2,489,446 + Psest_2336 0.60 +1.4 2,489,496 + Psest_2336 0.68 +0.4 2,489,496 + Psest_2336 0.68 +1.3 2,489,598 + Psest_2336 0.85 +0.7 2,489,599 - Psest_2336 0.85 +0.6 2,489,599 - Psest_2336 0.85 +0.3 2,489,602 - Psest_2336 0.86 +0.3 2,489,682 + +0.3 2,489,682 + +1.6 2,489,683 - +0.1 2,489,683 - +0.8 2,489,683 - -0.6 2,489,683 - +1.4 2,489,733 - -1.5 2,489,788 + Psest_2337 0.13 +0.5 2,489,789 - Psest_2337 0.13 +1.4 2,490,190 + Psest_2337 0.71 +0.4 2,490,190 + Psest_2337 0.71 +0.8 2,490,190 + Psest_2337 0.71 +1.3 2,490,191 - Psest_2337 0.71 -0.4 2,490,191 - Psest_2337 0.71 +1.0 2,490,191 - Psest_2337 0.71 +0.7 2,490,282 - Psest_2337 0.85 +0.2 2,490,582 + +1.1 2,490,583 - -0.1 2,490,770 + Psest_2338 0.15 +1.4 2,490,770 + Psest_2338 0.15 +0.7 2,490,912 - Psest_2338 0.21 +0.2 2,490,938 + Psest_2338 0.22 +1.4 2,490,938 + Psest_2338 0.22 +0.4 2,490,938 + Psest_2338 0.22 +1.4 2,490,938 + Psest_2338 0.22 +1.6 2,490,938 + Psest_2338 0.22 +0.3 2,490,938 + Psest_2338 0.22 -0.0 2,490,938 + Psest_2338 0.22 +1.9 2,490,939 - Psest_2338 0.22 -1.5 2,490,939 - Psest_2338 0.22 -0.3 2,490,939 - Psest_2338 0.22 +1.0 2,490,939 - Psest_2338 0.22 +0.4 2,490,939 - Psest_2338 0.22 -0.2 2,490,941 - Psest_2338 0.22 +1.3 2,491,305 + Psest_2338 0.37 -0.0 2,491,305 + Psest_2338 0.37 +0.5 2,491,305 + Psest_2338 0.37 +1.6 2,491,305 + Psest_2338 0.37 +0.6 2,491,306 - Psest_2338 0.37 +0.4 2,491,306 - Psest_2338 0.37 -0.1 2,491,306 - Psest_2338 0.37 -0.2 2,491,306 - Psest_2338 0.37 -1.6 2,491,306 - Psest_2338 0.37 +0.5 2,491,307 + Psest_2338 0.37 -0.0 2,491,307 + Psest_2338 0.37 +0.3 2,491,307 + Psest_2338 0.37 +0.9 2,491,307 + Psest_2338 0.37 -1.4 2,491,307 + Psest_2338 0.37 +2.8 2,491,307 + Psest_2338 0.37 +0.3 2,491,307 + Psest_2338 0.37 +0.2 2,491,307 + Psest_2338 0.37 +0.2 2,491,307 + Psest_2338 0.37 +0.8 2,491,308 - Psest_2338 0.37 +0.6 2,491,308 - Psest_2338 0.37 +0.1 2,491,308 - Psest_2338 0.37 +0.3 2,491,308 - Psest_2338 0.37 -2.0 2,491,308 - Psest_2338 0.37 -0.7
Or see this region's nucleotide sequence