Experiment: R2A with 1-octen-3-ol 0.904549 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS05730 and ABIE51_RS05735 are separated by 107 nucleotides ABIE51_RS05735 and ABIE51_RS05740 are separated by 54 nucleotides ABIE51_RS05740 and ABIE51_RS05745 are separated by 75 nucleotides
ABIE51_RS05730: ABIE51_RS05730 - ribose-phosphate diphosphokinase, at 1,231,371 to 1,232,330
_RS05730
ABIE51_RS05735: ABIE51_RS05735 - 50S ribosomal protein L25/general stress protein Ctc, at 1,232,438 to 1,233,091
_RS05735
ABIE51_RS05740: ABIE51_RS05740 - aminoacyl-tRNA hydrolase, at 1,233,146 to 1,233,724
_RS05740
ABIE51_RS05745: ABIE51_RS05745 - redox-regulated ATPase YchF, at 1,233,800 to 1,234,891
_RS05745
Position (kb) 1233
1234 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1233.089 kb on + strand at 1233.089 kb on + strand at 1233.089 kb on + strand at 1233.089 kb on + strand at 1234.153 kb on + strand, within ABIE51_RS05745 at 1234.409 kb on + strand, within ABIE51_RS05745 at 1234.409 kb on + strand, within ABIE51_RS05745 at 1234.409 kb on + strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.410 kb on - strand, within ABIE51_RS05745 at 1234.619 kb on + strand, within ABIE51_RS05745 at 1234.620 kb on - strand, within ABIE51_RS05745 at 1234.620 kb on - strand, within ABIE51_RS05745 at 1234.643 kb on + strand, within ABIE51_RS05745 at 1234.643 kb on + strand, within ABIE51_RS05745 at 1234.643 kb on + strand, within ABIE51_RS05745 at 1234.643 kb on + strand, within ABIE51_RS05745 at 1234.643 kb on + strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745 at 1234.644 kb on - strand, within ABIE51_RS05745
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 0.904549 mM remove 1,233,089 + +0.0 1,233,089 + -0.0 1,233,089 + -0.1 1,233,089 + -0.2 1,234,153 + ABIE51_RS05745 0.32 -1.1 1,234,409 + ABIE51_RS05745 0.56 +0.0 1,234,409 + ABIE51_RS05745 0.56 -0.4 1,234,409 + ABIE51_RS05745 0.56 -0.6 1,234,410 - ABIE51_RS05745 0.56 -0.4 1,234,410 - ABIE51_RS05745 0.56 -0.3 1,234,410 - ABIE51_RS05745 0.56 +0.0 1,234,410 - ABIE51_RS05745 0.56 -0.4 1,234,410 - ABIE51_RS05745 0.56 -1.1 1,234,410 - ABIE51_RS05745 0.56 -0.9 1,234,410 - ABIE51_RS05745 0.56 +0.3 1,234,410 - ABIE51_RS05745 0.56 +1.6 1,234,619 + ABIE51_RS05745 0.75 +0.1 1,234,620 - ABIE51_RS05745 0.75 -0.2 1,234,620 - ABIE51_RS05745 0.75 -0.3 1,234,643 + ABIE51_RS05745 0.77 -0.8 1,234,643 + ABIE51_RS05745 0.77 +0.1 1,234,643 + ABIE51_RS05745 0.77 +0.6 1,234,643 + ABIE51_RS05745 0.77 -0.1 1,234,643 + ABIE51_RS05745 0.77 -1.4 1,234,644 - ABIE51_RS05745 0.77 -3.2 1,234,644 - ABIE51_RS05745 0.77 -1.0 1,234,644 - ABIE51_RS05745 0.77 +0.3 1,234,644 - ABIE51_RS05745 0.77 -0.4 1,234,644 - ABIE51_RS05745 0.77 -2.1 1,234,644 - ABIE51_RS05745 0.77 -0.1 1,234,644 - ABIE51_RS05745 0.77 -2.0 1,234,644 - ABIE51_RS05745 0.77 -1.1 1,234,644 - ABIE51_RS05745 0.77 -2.8 1,234,644 - ABIE51_RS05745 0.77 -1.5
Or see this region's nucleotide sequence