Experiment: R2A with 1-octen-3-ol 0.904549 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS14655 and ABIE51_RS14660 are separated by 386 nucleotides ABIE51_RS14660 and ABIE51_RS14665 are separated by 198 nucleotides
ABIE51_RS14655: ABIE51_RS14655 - ESPR-type extended signal peptide-containing protein, at 3,177,052 to 3,181,851
_RS14655
ABIE51_RS14660: ABIE51_RS14660 - alpha/beta fold hydrolase, at 3,182,238 to 3,183,119
_RS14660
ABIE51_RS14665: ABIE51_RS14665 - glycosyltransferase family 4 protein, at 3,183,318 to 3,184,376
_RS14665
Position (kb)
3182
3183
3184 Strain fitness (log2 ratio)
-1
0
1 at 3181.293 kb on + strand, within ABIE51_RS14655 at 3181.293 kb on + strand, within ABIE51_RS14655 at 3181.294 kb on - strand, within ABIE51_RS14655 at 3181.294 kb on - strand, within ABIE51_RS14655 at 3181.517 kb on + strand at 3181.517 kb on + strand at 3181.518 kb on - strand at 3181.518 kb on - strand at 3181.934 kb on - strand at 3181.936 kb on - strand at 3181.936 kb on - strand at 3181.948 kb on + strand at 3182.019 kb on - strand at 3182.026 kb on + strand at 3182.027 kb on - strand at 3182.027 kb on - strand at 3182.027 kb on - strand at 3182.722 kb on + strand, within ABIE51_RS14660 at 3182.786 kb on - strand, within ABIE51_RS14660 at 3182.949 kb on + strand, within ABIE51_RS14660 at 3183.042 kb on + strand at 3183.043 kb on - strand at 3183.224 kb on + strand at 3183.225 kb on - strand at 3183.225 kb on - strand at 3183.225 kb on - strand at 3183.225 kb on - strand at 3183.237 kb on + strand at 3183.369 kb on + strand at 3183.370 kb on - strand at 3183.370 kb on - strand at 3183.699 kb on + strand, within ABIE51_RS14665 at 3183.699 kb on + strand, within ABIE51_RS14665 at 3183.700 kb on - strand, within ABIE51_RS14665 at 3183.700 kb on - strand, within ABIE51_RS14665 at 3183.700 kb on - strand, within ABIE51_RS14665 at 3183.840 kb on + strand, within ABIE51_RS14665 at 3183.960 kb on + strand, within ABIE51_RS14665 at 3183.961 kb on - strand, within ABIE51_RS14665 at 3184.008 kb on + strand, within ABIE51_RS14665 at 3184.009 kb on - strand, within ABIE51_RS14665
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 0.904549 mM remove 3,181,293 + ABIE51_RS14655 0.88 -0.0 3,181,293 + ABIE51_RS14655 0.88 -0.6 3,181,294 - ABIE51_RS14655 0.88 -0.4 3,181,294 - ABIE51_RS14655 0.88 +0.7 3,181,517 + +0.2 3,181,517 + -0.2 3,181,518 - -0.9 3,181,518 - +0.5 3,181,934 - +0.1 3,181,936 - +0.1 3,181,936 - +0.3 3,181,948 + +0.2 3,182,019 - -0.4 3,182,026 + -0.8 3,182,027 - -0.3 3,182,027 - +0.2 3,182,027 - -1.5 3,182,722 + ABIE51_RS14660 0.55 -0.0 3,182,786 - ABIE51_RS14660 0.62 +0.9 3,182,949 + ABIE51_RS14660 0.81 -0.3 3,183,042 + +0.1 3,183,043 - +0.4 3,183,224 + -0.1 3,183,225 - -0.7 3,183,225 - -0.0 3,183,225 - -0.7 3,183,225 - +0.7 3,183,237 + -0.7 3,183,369 + +0.1 3,183,370 - -0.2 3,183,370 - +0.8 3,183,699 + ABIE51_RS14665 0.36 -1.3 3,183,699 + ABIE51_RS14665 0.36 +0.1 3,183,700 - ABIE51_RS14665 0.36 -0.4 3,183,700 - ABIE51_RS14665 0.36 +0.5 3,183,700 - ABIE51_RS14665 0.36 -0.0 3,183,840 + ABIE51_RS14665 0.49 +0.3 3,183,960 + ABIE51_RS14665 0.61 +0.0 3,183,961 - ABIE51_RS14665 0.61 -0.5 3,184,008 + ABIE51_RS14665 0.65 -0.1 3,184,009 - ABIE51_RS14665 0.65 -0.2
Or see this region's nucleotide sequence