Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS14150

Experiment: R2A with 1-octen-3-ol 0.904549 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 1-octen-3-ol 0.904549 mM
3,058,553	+		ABIE51_RS14145	0.72	-1.7
3,058,553	+		ABIE51_RS14145	0.72	-0.5
3,058,553	+		ABIE51_RS14145	0.72	-1.7
3,058,553	+		ABIE51_RS14145	0.72	-0.2
3,058,553	+		ABIE51_RS14145	0.72	-0.9
3,058,554	-		ABIE51_RS14145	0.72	+0.3
3,058,554	-		ABIE51_RS14145	0.72	+0.0
3,058,556	+		ABIE51_RS14145	0.72	-1.1
3,058,556	+		ABIE51_RS14145	0.72	+1.3
3,058,557	-		ABIE51_RS14145	0.72	-1.4
3,058,557	-		ABIE51_RS14145	0.72	-1.7
3,058,557	-		ABIE51_RS14145	0.72	-0.7
3,058,557	-		ABIE51_RS14145	0.72	-0.8
3,058,817	+		ABIE51_RS14145	0.82	-1.0
3,058,817	+		ABIE51_RS14145	0.82	+0.0
3,058,817	+		ABIE51_RS14145	0.82	-0.2
3,058,817	+		ABIE51_RS14145	0.82	-1.1
3,058,817	+		ABIE51_RS14145	0.82	-0.6
3,058,817	+		ABIE51_RS14145	0.82	+0.9
3,058,818	-		ABIE51_RS14145	0.82	-0.5
3,058,818	-		ABIE51_RS14145	0.82	-1.5
3,058,818	-		ABIE51_RS14145	0.82	-1.4
3,058,818	-		ABIE51_RS14145	0.82	-2.0
3,059,036	+				-1.2
3,059,036	+				-1.3
3,059,036	+				+1.3
3,059,036	+				-0.5
3,059,036	+				-1.1
3,059,036	+				-1.8
3,059,036	+				-1.2
3,059,037	-				-1.0
3,059,037	-				-0.6
3,059,037	-				+0.3
3,059,037	-				-0.8
3,059,037	-				-0.9
3,059,037	-				-1.3
3,059,236	+				-0.8
3,059,237	-				-0.2
3,059,360	+				-0.2
3,059,360	+				-0.2
3,059,360	+				+0.4
3,059,360	+				-0.2
3,059,361	-				+1.0
3,059,361	-				+0.8
3,059,361	-				+0.4
3,059,382	+				+0.2
3,059,495	+				+0.3
3,059,496	-				+0.1
3,059,496	-				+0.2
3,059,496	-				+0.0
3,059,496	-				+0.2
3,059,504	+				-0.2
3,059,504	+				-1.6
3,059,505	-				+0.2
3,059,505	-				-0.7
3,059,505	-				-1.1
3,059,579	+				-2.1
3,059,579	+				-2.6
3,059,579	+				-1.6
3,059,579	+				-1.0
3,059,579	+				-0.5
3,059,579	+				-2.1
3,059,579	+				-3.0
3,059,579	+				-1.7
3,059,579	+				-1.0
3,059,579	+				-2.8
3,059,580	-				-2.7
3,059,580	-				-1.7
3,059,580	-				-2.0
3,059,580	-				-2.0
3,059,580	-				-2.3
3,059,580	-				-2.0
3,059,580	-				-1.8
3,059,580	-				-3.4
3,059,580	-				-3.5
3,060,112	+		ABIE51_RS14150	0.51	+0.3
3,060,112	+		ABIE51_RS14150	0.51	-0.5
3,060,113	-		ABIE51_RS14150	0.51	-1.8
3,060,113	-		ABIE51_RS14150	0.51	-3.2
3,060,113	-		ABIE51_RS14150	0.51	-1.5
3,060,188	+		ABIE51_RS14150	0.57	-2.1
3,060,188	+		ABIE51_RS14150	0.57	-1.1
3,060,188	+		ABIE51_RS14150	0.57	-2.9
3,060,189	-		ABIE51_RS14150	0.57	-1.2
3,060,189	-		ABIE51_RS14150	0.57	-2.1
3,060,189	-		ABIE51_RS14150	0.57	-0.2
3,060,189	-		ABIE51_RS14150	0.57	-2.9
3,060,189	-		ABIE51_RS14150	0.57	-2.7
3,060,221	+		ABIE51_RS14150	0.60	-2.2
3,060,221	+		ABIE51_RS14150	0.60	-1.7
3,060,221	+		ABIE51_RS14150	0.60	-2.4
3,060,222	-		ABIE51_RS14150	0.60	-2.3
3,060,222	-		ABIE51_RS14150	0.60	-1.7
3,060,222	-		ABIE51_RS14150	0.60	-2.2
3,060,222	-		ABIE51_RS14150	0.60	-2.1
3,060,275	+		ABIE51_RS14150	0.64	-2.2
3,060,276	-		ABIE51_RS14150	0.64	+0.8
3,060,276	-		ABIE51_RS14150	0.64	-1.0
3,060,446	+		ABIE51_RS14150	0.77	-1.4
3,060,446	+		ABIE51_RS14150	0.77	+0.9
3,060,446	+		ABIE51_RS14150	0.77	-0.5
3,060,446	+		ABIE51_RS14150	0.77	-1.8
3,060,446	+		ABIE51_RS14150	0.77	-2.0
3,060,446	+		ABIE51_RS14150	0.77	-2.8
3,060,447	-		ABIE51_RS14150	0.77	-2.8
3,060,447	-		ABIE51_RS14150	0.77	-1.8
3,060,447	-		ABIE51_RS14150	0.77	-2.9
3,060,447	-		ABIE51_RS14150	0.77	-1.8
3,060,447	-		ABIE51_RS14150	0.77	+0.8
3,060,455	+		ABIE51_RS14150	0.78	-1.4
3,060,455	+		ABIE51_RS14150	0.78	-2.7
3,060,455	+		ABIE51_RS14150	0.78	-2.2
3,060,456	-		ABIE51_RS14150	0.78	-1.5
3,060,456	-		ABIE51_RS14150	0.78	-0.2
3,060,456	-		ABIE51_RS14150	0.78	-1.8
3,060,456	-		ABIE51_RS14150	0.78	-1.3
3,060,503	+		ABIE51_RS14150	0.81	-0.1
3,060,503	+		ABIE51_RS14150	0.81	-2.4
3,060,503	+		ABIE51_RS14150	0.81	+0.8
3,060,504	-		ABIE51_RS14150	0.82	-1.2
3,060,689	+				-1.1
3,060,690	-				-2.3
3,060,690	-				-2.2
3,060,690	-				-2.6
3,060,690	-				-1.5
3,060,690	-				-1.0
3,060,829	+				-0.2
3,060,829	+				-1.2
3,060,829	+				-0.2
3,060,829	+				+0.3
3,060,830	-				-0.6
3,060,830	-				+0.5
3,060,962	+				-1.7
3,060,962	+				-2.2
3,061,172	+		ABIE51_RS14155	0.43	-1.0
3,061,173	-		ABIE51_RS14155	0.43	-2.6
3,061,262	+		ABIE51_RS14155	0.57	+1.3
3,061,262	+		ABIE51_RS14155	0.57	-1.7
3,061,262	+		ABIE51_RS14155	0.57	-3.5
3,061,262	+		ABIE51_RS14155	0.57	-1.2
3,061,262	+		ABIE51_RS14155	0.57	-2.4
3,061,262	+		ABIE51_RS14155	0.57	-0.7
3,061,262	+		ABIE51_RS14155	0.57	-2.1
3,061,263	-		ABIE51_RS14155	0.57	-1.2
3,061,263	-		ABIE51_RS14155	0.57	-1.7
3,061,263	-		ABIE51_RS14155	0.57	-1.2
3,061,263	-		ABIE51_RS14155	0.57	-1.5
3,061,263	-		ABIE51_RS14155	0.57	-0.7
3,061,263	-		ABIE51_RS14155	0.57	-2.1
3,061,277	+		ABIE51_RS14155	0.59	-0.2
3,061,277	+		ABIE51_RS14155	0.59	-1.8
3,061,277	+		ABIE51_RS14155	0.59	-2.6
3,061,277	+		ABIE51_RS14155	0.59	+0.3
3,061,278	-		ABIE51_RS14155	0.60	-3.6
3,061,278	-		ABIE51_RS14155	0.60	-1.2
3,061,278	-		ABIE51_RS14155	0.60	-0.7
3,061,278	-		ABIE51_RS14155	0.60	+0.3
3,061,278	-		ABIE51_RS14155	0.60	-0.7
3,061,322	+		ABIE51_RS14155	0.67	-2.1
3,061,322	+		ABIE51_RS14155	0.67	-1.5
3,061,322	+		ABIE51_RS14155	0.67	-1.7
3,061,323	-		ABIE51_RS14155	0.67	-1.5
3,061,323	-		ABIE51_RS14155	0.67	-1.5
3,061,323	-		ABIE51_RS14155	0.67	-1.7
3,061,448	+		ABIE51_RS14155	0.87	-2.2
3,061,448	+		ABIE51_RS14155	0.87	-1.2
3,061,448	+		ABIE51_RS14155	0.87	-1.8
3,061,448	+		ABIE51_RS14155	0.87	+0.3
3,061,449	-		ABIE51_RS14155	0.87	-1.9
3,061,449	-		ABIE51_RS14155	0.87	-3.2
3,061,449	-		ABIE51_RS14155	0.87	-1.5
3,061,457	+		ABIE51_RS14155	0.88	-2.1
3,061,457	+		ABIE51_RS14155	0.88	-1.7
3,061,458	-		ABIE51_RS14155	0.88	-1.0
3,061,458	-		ABIE51_RS14155	0.88	-3.0
3,061,458	-		ABIE51_RS14155	0.88	-0.2
3,061,554	+				-2.1
3,061,555	-				+0.5
3,061,626	+				-0.5
3,061,626	+				-0.2
3,061,626	+				-0.3
3,061,627	-				-0.0
3,061,627	-				-0.1
3,061,627	-				+0.2
3,061,627	-				+0.4
3,061,627	-				-0.0
3,061,627	-				-0.6
3,061,675	+				-0.0
3,061,675	+				-0.2
3,061,675	+				+0.0
3,061,675	+				+0.2
3,061,676	-				-0.7