Experiment: R2A with 1-octen-3-ol 1.08545883333333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS01690 and ABIE51_RS01695 are separated by 256 nucleotides ABIE51_RS01695 and ABIE51_RS01700 are separated by 13 nucleotides ABIE51_RS01700 and ABIE51_RS01705 are separated by 325 nucleotides
ABIE51_RS01690: ABIE51_RS01690 - TonB-dependent receptor, at 378,265 to 381,162
_RS01690
ABIE51_RS01695: ABIE51_RS01695 - 50S ribosomal protein L33, at 381,419 to 381,583
_RS01695
ABIE51_RS01700: ABIE51_RS01700 - 50S ribosomal protein L28, at 381,597 to 381,833
_RS01700
ABIE51_RS01705: ABIE51_RS01705 - DUF885 family protein, at 382,159 to 383,919
_RS01705
Position (kb) 381
382 Strain fitness (log2 ratio) -2
-1
0
1 at 380.435 kb on + strand, within ABIE51_RS01690 at 380.436 kb on - strand, within ABIE51_RS01690 at 380.436 kb on - strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.506 kb on + strand, within ABIE51_RS01690 at 380.507 kb on - strand, within ABIE51_RS01690 at 380.641 kb on + strand, within ABIE51_RS01690 at 380.642 kb on - strand, within ABIE51_RS01690 at 380.660 kb on - strand, within ABIE51_RS01690 at 380.660 kb on - strand, within ABIE51_RS01690 at 380.713 kb on + strand, within ABIE51_RS01690 at 380.713 kb on + strand, within ABIE51_RS01690 at 380.713 kb on + strand, within ABIE51_RS01690 at 380.713 kb on + strand, within ABIE51_RS01690 at 380.714 kb on - strand, within ABIE51_RS01690 at 380.722 kb on + strand, within ABIE51_RS01690 at 380.731 kb on + strand, within ABIE51_RS01690 at 380.731 kb on + strand, within ABIE51_RS01690 at 380.732 kb on - strand, within ABIE51_RS01690 at 380.839 kb on + strand, within ABIE51_RS01690 at 380.839 kb on + strand, within ABIE51_RS01690 at 380.839 kb on + strand, within ABIE51_RS01690 at 380.839 kb on + strand, within ABIE51_RS01690 at 380.839 kb on + strand, within ABIE51_RS01690 at 380.839 kb on + strand, within ABIE51_RS01690 at 380.840 kb on - strand, within ABIE51_RS01690 at 380.873 kb on - strand at 380.873 kb on - strand at 380.875 kb on + strand at 380.875 kb on + strand at 380.876 kb on - strand at 380.876 kb on - strand at 380.903 kb on - strand at 380.941 kb on + strand at 381.004 kb on + strand at 381.004 kb on + strand at 381.005 kb on - strand at 381.005 kb on - strand at 381.076 kb on + strand at 381.076 kb on + strand at 381.076 kb on + strand at 381.076 kb on + strand at 381.076 kb on + strand at 381.076 kb on + strand at 381.077 kb on - strand at 381.077 kb on - strand at 381.077 kb on - strand at 381.103 kb on + strand at 381.104 kb on - strand at 381.137 kb on - strand at 381.145 kb on + strand at 381.146 kb on - strand at 381.146 kb on - strand at 381.184 kb on - strand at 381.184 kb on - strand at 381.203 kb on + strand at 381.204 kb on - strand at 381.274 kb on + strand at 381.275 kb on - strand at 381.276 kb on + strand at 381.276 kb on + strand at 381.276 kb on + strand at 381.276 kb on + strand at 381.276 kb on + strand at 381.276 kb on + strand at 381.276 kb on + strand at 381.277 kb on - strand at 381.277 kb on - strand at 381.277 kb on - strand at 381.442 kb on - strand, within ABIE51_RS01695 at 381.472 kb on - strand, within ABIE51_RS01695 at 381.526 kb on - strand, within ABIE51_RS01695 at 382.025 kb on - strand at 382.025 kb on - strand at 382.367 kb on + strand, within ABIE51_RS01705 at 382.367 kb on + strand, within ABIE51_RS01705 at 382.367 kb on + strand, within ABIE51_RS01705 at 382.367 kb on + strand, within ABIE51_RS01705 at 382.368 kb on - strand, within ABIE51_RS01705 at 382.368 kb on - strand, within ABIE51_RS01705 at 382.397 kb on + strand, within ABIE51_RS01705 at 382.397 kb on + strand, within ABIE51_RS01705 at 382.397 kb on + strand, within ABIE51_RS01705 at 382.397 kb on + strand, within ABIE51_RS01705 at 382.398 kb on - strand, within ABIE51_RS01705 at 382.398 kb on - strand, within ABIE51_RS01705 at 382.398 kb on - strand, within ABIE51_RS01705 at 382.398 kb on - strand, within ABIE51_RS01705 at 382.398 kb on - strand, within ABIE51_RS01705 at 382.455 kb on - strand, within ABIE51_RS01705 at 382.455 kb on - strand, within ABIE51_RS01705 at 382.536 kb on - strand, within ABIE51_RS01705 at 382.536 kb on - strand, within ABIE51_RS01705 at 382.536 kb on - strand, within ABIE51_RS01705 at 382.560 kb on - strand, within ABIE51_RS01705 at 382.571 kb on + strand, within ABIE51_RS01705 at 382.571 kb on + strand, within ABIE51_RS01705 at 382.571 kb on + strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705 at 382.572 kb on - strand, within ABIE51_RS01705
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 1.08545883333333 mM remove 380,435 + ABIE51_RS01690 0.75 -0.7 380,436 - ABIE51_RS01690 0.75 -0.6 380,436 - ABIE51_RS01690 0.75 +0.3 380,506 + ABIE51_RS01690 0.77 +0.8 380,506 + ABIE51_RS01690 0.77 -0.5 380,506 + ABIE51_RS01690 0.77 +0.4 380,506 + ABIE51_RS01690 0.77 -0.2 380,506 + ABIE51_RS01690 0.77 -0.4 380,506 + ABIE51_RS01690 0.77 -0.1 380,506 + ABIE51_RS01690 0.77 -0.2 380,506 + ABIE51_RS01690 0.77 -1.3 380,507 - ABIE51_RS01690 0.77 +0.1 380,641 + ABIE51_RS01690 0.82 -0.6 380,642 - ABIE51_RS01690 0.82 +0.1 380,660 - ABIE51_RS01690 0.83 -0.1 380,660 - ABIE51_RS01690 0.83 -0.8 380,713 + ABIE51_RS01690 0.84 +0.2 380,713 + ABIE51_RS01690 0.84 +0.8 380,713 + ABIE51_RS01690 0.84 -0.5 380,713 + ABIE51_RS01690 0.84 -0.1 380,714 - ABIE51_RS01690 0.85 +0.1 380,722 + ABIE51_RS01690 0.85 -0.9 380,731 + ABIE51_RS01690 0.85 -0.1 380,731 + ABIE51_RS01690 0.85 -0.4 380,732 - ABIE51_RS01690 0.85 +0.4 380,839 + ABIE51_RS01690 0.89 +0.0 380,839 + ABIE51_RS01690 0.89 -0.0 380,839 + ABIE51_RS01690 0.89 -0.5 380,839 + ABIE51_RS01690 0.89 -0.0 380,839 + ABIE51_RS01690 0.89 +0.3 380,839 + ABIE51_RS01690 0.89 -0.1 380,840 - ABIE51_RS01690 0.89 -0.3 380,873 - -0.2 380,873 - +0.2 380,875 + +0.5 380,875 + -0.1 380,876 - +0.0 380,876 - +0.2 380,903 - -0.0 380,941 + -0.6 381,004 + -0.2 381,004 + +0.1 381,005 - -0.8 381,005 - -0.3 381,076 + +0.1 381,076 + +0.0 381,076 + -0.7 381,076 + +0.2 381,076 + +0.1 381,076 + -0.3 381,077 - -0.4 381,077 - +0.5 381,077 - +0.4 381,103 + +0.4 381,104 - +0.2 381,137 - -0.0 381,145 + +0.3 381,146 - +0.4 381,146 - +0.0 381,184 - -0.0 381,184 - -0.2 381,203 + -0.4 381,204 - -0.0 381,274 + +1.1 381,275 - -0.3 381,276 + +0.6 381,276 + -0.4 381,276 + +0.2 381,276 + -1.5 381,276 + -0.2 381,276 + -0.2 381,276 + -0.2 381,277 - +0.6 381,277 - -0.2 381,277 - -0.2 381,442 - ABIE51_RS01695 0.14 +0.2 381,472 - ABIE51_RS01695 0.32 -1.1 381,526 - ABIE51_RS01695 0.65 -0.5 382,025 - -0.5 382,025 - +0.3 382,367 + ABIE51_RS01705 0.12 +0.3 382,367 + ABIE51_RS01705 0.12 -2.6 382,367 + ABIE51_RS01705 0.12 +0.4 382,367 + ABIE51_RS01705 0.12 +0.5 382,368 - ABIE51_RS01705 0.12 +0.1 382,368 - ABIE51_RS01705 0.12 +0.4 382,397 + ABIE51_RS01705 0.14 +0.0 382,397 + ABIE51_RS01705 0.14 +0.2 382,397 + ABIE51_RS01705 0.14 -0.1 382,397 + ABIE51_RS01705 0.14 +0.2 382,398 - ABIE51_RS01705 0.14 -0.3 382,398 - ABIE51_RS01705 0.14 -0.1 382,398 - ABIE51_RS01705 0.14 -0.0 382,398 - ABIE51_RS01705 0.14 -0.6 382,398 - ABIE51_RS01705 0.14 +0.3 382,455 - ABIE51_RS01705 0.17 -0.2 382,455 - ABIE51_RS01705 0.17 -0.1 382,536 - ABIE51_RS01705 0.21 -0.2 382,536 - ABIE51_RS01705 0.21 +0.2 382,536 - ABIE51_RS01705 0.21 -0.7 382,560 - ABIE51_RS01705 0.23 +0.0 382,571 + ABIE51_RS01705 0.23 -0.5 382,571 + ABIE51_RS01705 0.23 -0.3 382,571 + ABIE51_RS01705 0.23 -0.0 382,572 - ABIE51_RS01705 0.23 +0.1 382,572 - ABIE51_RS01705 0.23 -0.4 382,572 - ABIE51_RS01705 0.23 +0.0 382,572 - ABIE51_RS01705 0.23 +0.3 382,572 - ABIE51_RS01705 0.23 +0.3 382,572 - ABIE51_RS01705 0.23 +0.7 382,572 - ABIE51_RS01705 0.23 -0.1 382,572 - ABIE51_RS01705 0.23 +0.0
Or see this region's nucleotide sequence