Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12300

Experiment: R2A with 1-octen-3-ol 1.3568235 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 1-octen-3-ol 1.3568235 mM
2,654,218	+		ABIE51_RS12290	0.77	-0.3
2,654,218	+		ABIE51_RS12290	0.77	+0.3
2,654,219	-		ABIE51_RS12290	0.77	-0.4
2,654,219	-		ABIE51_RS12290	0.77	-0.1
2,654,219	-		ABIE51_RS12290	0.77	-0.1
2,654,219	-		ABIE51_RS12290	0.77	-0.2
2,654,275	+		ABIE51_RS12290	0.80	+0.3
2,654,276	-		ABIE51_RS12290	0.80	+0.1
2,654,407	+		ABIE51_RS12290	0.87	+0.3
2,654,407	+		ABIE51_RS12290	0.87	+0.8
2,654,407	+		ABIE51_RS12290	0.87	+0.2
2,654,407	+		ABIE51_RS12290	0.87	-1.5
2,654,407	+		ABIE51_RS12290	0.87	-0.1
2,654,407	+		ABIE51_RS12290	0.87	-1.4
2,654,407	+		ABIE51_RS12290	0.87	-0.6
2,654,407	+		ABIE51_RS12290	0.87	+0.3
2,654,408	-		ABIE51_RS12290	0.87	+0.3
2,654,408	-		ABIE51_RS12290	0.87	+0.3
2,654,408	-		ABIE51_RS12290	0.87	-0.3
2,654,408	-		ABIE51_RS12290	0.87	+0.0
2,654,408	-		ABIE51_RS12290	0.87	+0.6
2,654,408	-		ABIE51_RS12290	0.87	-0.4
2,654,408	-		ABIE51_RS12290	0.87	-0.7
2,654,408	-		ABIE51_RS12290	0.87	+1.0
2,654,408	-		ABIE51_RS12290	0.87	-0.1
2,654,408	-		ABIE51_RS12290	0.87	-0.1
2,654,581	-				+0.9
2,654,581	-				+0.3
2,654,581	-				+0.4
2,654,590	+				-0.4
2,654,590	+				+0.5
2,654,590	+				-0.2
2,654,591	-				+0.3
2,654,668	+				-0.5
2,654,668	+				-0.1
2,654,668	+				-1.0
2,654,669	-				-0.5
2,654,669	-				-0.8
2,654,669	-				+1.4
2,654,669	-				+0.2
2,654,669	-				-1.3
2,654,669	-				+0.4
2,654,669	-				-0.0
2,654,669	-				-0.3
2,654,723	-				-0.0
2,654,723	-				-0.2
2,654,723	-				-0.7
2,654,762	+				-0.2
2,654,763	-				+0.3
2,654,790	+				-0.6
2,654,790	+				+0.5
2,654,921	+		ABIE51_RS12295	0.35	-0.1
2,654,921	+		ABIE51_RS12295	0.35	-0.2
2,654,921	+		ABIE51_RS12295	0.35	+0.1
2,654,921	+		ABIE51_RS12295	0.35	+0.2
2,654,921	+		ABIE51_RS12295	0.35	+0.3
2,654,922	-		ABIE51_RS12295	0.35	-0.6
2,654,922	-		ABIE51_RS12295	0.35	+0.0
2,654,922	-		ABIE51_RS12295	0.35	-0.9
2,654,922	-		ABIE51_RS12295	0.35	-1.0
2,654,922	-		ABIE51_RS12295	0.35	-0.5
2,654,922	-		ABIE51_RS12295	0.35	+0.6
2,654,922	-		ABIE51_RS12295	0.35	-0.5
2,654,930	+		ABIE51_RS12295	0.38	-0.3
2,654,930	+		ABIE51_RS12295	0.38	-0.3
2,654,930	+		ABIE51_RS12295	0.38	+0.3
2,654,931	-		ABIE51_RS12295	0.39	+0.1
2,654,931	-		ABIE51_RS12295	0.39	-0.6
2,654,931	-		ABIE51_RS12295	0.39	+0.2
2,655,002	+		ABIE51_RS12295	0.66	-0.2
2,655,002	+		ABIE51_RS12295	0.66	+0.5
2,655,002	+		ABIE51_RS12295	0.66	-1.5
2,655,056	+		ABIE51_RS12295	0.87	-0.0
2,655,056	+		ABIE51_RS12295	0.87	-0.1
2,655,056	+		ABIE51_RS12295	0.87	+0.4
2,655,057	-		ABIE51_RS12295	0.88	+0.4
2,655,057	-		ABIE51_RS12295	0.88	-0.0
2,655,057	-		ABIE51_RS12295	0.88	-0.3
2,655,234	+		ABIE51_RS12300	0.20	+1.0
2,655,234	+		ABIE51_RS12300	0.20	-0.9
2,655,234	+		ABIE51_RS12300	0.20	-0.4
2,655,234	+		ABIE51_RS12300	0.20	-0.5
2,655,234	+		ABIE51_RS12300	0.20	-0.4
2,655,235	-		ABIE51_RS12300	0.20	-0.9
2,655,235	-		ABIE51_RS12300	0.20	-0.4
2,655,235	-		ABIE51_RS12300	0.20	+0.7
2,655,235	-		ABIE51_RS12300	0.20	-0.3
2,655,235	-		ABIE51_RS12300	0.20	-0.0
2,655,235	-		ABIE51_RS12300	0.20	-0.5
2,655,235	-		ABIE51_RS12300	0.20	+0.3
2,655,235	-		ABIE51_RS12300	0.20	-0.2
2,655,237	+		ABIE51_RS12300	0.20	+0.6
2,655,237	+		ABIE51_RS12300	0.20	-0.6
2,655,237	+		ABIE51_RS12300	0.20	-0.7
2,655,237	+		ABIE51_RS12300	0.20	-0.2
2,655,237	+		ABIE51_RS12300	0.20	-0.3
2,655,237	+		ABIE51_RS12300	0.20	-0.9
2,655,238	-		ABIE51_RS12300	0.20	-0.1
2,655,238	-		ABIE51_RS12300	0.20	-1.5
2,655,238	-		ABIE51_RS12300	0.20	-1.0
2,655,238	-		ABIE51_RS12300	0.20	+0.1
2,655,391	-		ABIE51_RS12300	0.45	-0.6
2,655,597	+		ABIE51_RS12300	0.78	-0.4
2,655,597	+		ABIE51_RS12300	0.78	-1.0
2,655,597	+		ABIE51_RS12300	0.78	-0.5
2,655,598	-		ABIE51_RS12300	0.78	-0.6
2,655,598	-		ABIE51_RS12300	0.78	-0.3
2,655,598	-		ABIE51_RS12300	0.78	+1.8
2,655,598	-		ABIE51_RS12300	0.78	-0.9
2,655,598	-		ABIE51_RS12300	0.78	-0.6
2,655,598	-		ABIE51_RS12300	0.78	-1.1
2,655,598	-		ABIE51_RS12300	0.78	-0.5
2,655,598	-		ABIE51_RS12300	0.78	-0.5
2,655,727	-				-0.6
2,655,727	-				-0.7
2,655,749	+				+0.2
2,655,749	+				-1.5
2,655,750	-				-1.5
2,655,804	+				+0.3
2,655,804	+				+0.4
2,655,805	-				-0.3
2,655,805	-				+0.5
2,655,805	-				-0.4
2,655,834	+				-0.6
2,655,834	+				+0.3
2,655,834	+				-0.4
2,655,834	+				+0.1
2,655,834	+				+0.8
2,655,834	+				+0.1
2,655,834	+				-0.5
2,655,835	-				-0.0
2,655,835	-				-0.2
2,655,835	-				+0.2
2,655,835	-				+0.4
2,655,835	-				-0.3
2,655,835	-				+0.4
2,655,835	-				+0.1
2,655,835	-				-0.9
2,655,835	-				-0.1
2,655,860	+				+0.5
2,655,860	+				-0.4
2,655,861	-				-0.5
2,655,957	+				-0.0
2,655,957	+				-0.4
2,655,958	-				+0.2
2,656,076	-				-0.1
2,656,076	-				-0.5
2,656,076	-				+0.0
2,656,076	-				+0.6
2,656,076	-				+0.3
2,656,135	+		ABIE51_RS12305	0.13	+0.3
2,656,345	+		ABIE51_RS12305	0.38	+0.2
2,656,345	+		ABIE51_RS12305	0.38	-1.1
2,656,346	-		ABIE51_RS12305	0.38	-0.2
2,656,346	-		ABIE51_RS12305	0.38	-0.3
2,656,346	-		ABIE51_RS12305	0.38	+0.2
2,656,346	-		ABIE51_RS12305	0.38	-0.1
2,656,346	-		ABIE51_RS12305	0.38	-0.4
2,656,447	+		ABIE51_RS12305	0.50	-0.1
2,656,447	+		ABIE51_RS12305	0.50	+0.0
2,656,447	+		ABIE51_RS12305	0.50	-0.1
2,656,448	-		ABIE51_RS12305	0.50	+0.2
2,656,448	-		ABIE51_RS12305	0.50	+0.3
2,656,454	-		ABIE51_RS12305	0.51	+0.0
2,656,474	+		ABIE51_RS12305	0.53	+0.4
2,656,474	+		ABIE51_RS12305	0.53	+0.4
2,656,475	-		ABIE51_RS12305	0.53	+0.1
2,656,475	-		ABIE51_RS12305	0.53	+0.6
2,656,598	+		ABIE51_RS12305	0.67	+0.1
2,656,598	+		ABIE51_RS12305	0.67	+0.5
2,656,598	+		ABIE51_RS12305	0.67	-1.5
2,656,598	+		ABIE51_RS12305	0.67	+0.3
2,656,598	+		ABIE51_RS12305	0.67	-0.2
2,656,598	+		ABIE51_RS12305	0.67	+0.8
2,656,599	-		ABIE51_RS12305	0.68	-0.2
2,656,599	-		ABIE51_RS12305	0.68	-0.1
2,656,599	-		ABIE51_RS12305	0.68	+0.1
2,656,599	-		ABIE51_RS12305	0.68	-0.2
2,656,599	-		ABIE51_RS12305	0.68	+0.7
2,656,599	-		ABIE51_RS12305	0.68	+0.4
2,656,599	-		ABIE51_RS12305	0.68	+0.1
2,656,599	-		ABIE51_RS12305	0.68	-0.6
2,656,599	-		ABIE51_RS12305	0.68	+0.3
2,656,599	-		ABIE51_RS12305	0.68	+1.4
2,656,600	+		ABIE51_RS12305	0.68	-0.5
2,656,600	+		ABIE51_RS12305	0.68	-0.2
2,656,600	+		ABIE51_RS12305	0.68	+0.5
2,656,600	+		ABIE51_RS12305	0.68	+0.4
2,656,600	+		ABIE51_RS12305	0.68	+0.3
2,656,600	+		ABIE51_RS12305	0.68	-0.4
2,656,601	-		ABIE51_RS12305	0.68	+0.2
2,656,601	-		ABIE51_RS12305	0.68	+0.3
2,656,601	-		ABIE51_RS12305	0.68	-0.0
2,656,652	-		ABIE51_RS12305	0.74	-0.2
2,656,652	-		ABIE51_RS12305	0.74	+1.0
2,656,652	-		ABIE51_RS12305	0.74	+0.1
2,656,652	-		ABIE51_RS12305	0.74	+0.1
2,656,683	+		ABIE51_RS12305	0.77	-0.1
2,656,684	-		ABIE51_RS12305	0.78	+0.7