Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3755c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
4,200,334	+				+0.2
4,200,334	+				-1.2
4,200,335	-				+0.1
4,200,338	+				-0.4
4,200,338	+				-0.3
4,200,338	+				-1.8
4,200,339	-				+0.2
4,200,339	-				+0.6
4,201,405	+		Rv3755c	0.19	-0.7
4,201,405	+		Rv3755c	0.19	-1.8
4,201,407	+		Rv3755c	0.20	+0.8
4,201,408	-		Rv3755c	0.20	+1.2
4,201,448	+		Rv3755c	0.27	-0.5
4,201,452	+		Rv3755c	0.27	+0.2
4,201,452	+		Rv3755c	0.27	-0.7
4,201,453	-		Rv3755c	0.27	-0.7
4,201,563	+		Rv3755c	0.46	-1.1
4,201,563	+		Rv3755c	0.46	-0.4
4,201,563	+		Rv3755c	0.46	-0.6
4,201,564	-		Rv3755c	0.46	-1.4
4,201,564	-		Rv3755c	0.46	-1.1
4,201,564	-		Rv3755c	0.46	+0.2
4,201,652	+		Rv3755c	0.60	-0.5
4,201,710	+		Rv3755c	0.70	+0.5
4,201,895	+				-2.0
4,202,091	-		Rv3756c	0.27	-0.1
4,202,091	-		Rv3756c	0.27	-0.4
4,202,164	+		Rv3756c	0.38	+1.8
4,202,198	-		Rv3756c	0.42	-0.4
4,202,198	-		Rv3756c	0.42	+1.8
4,202,198	-		Rv3756c	0.42	-1.0
4,202,198	-		Rv3756c	0.42	+0.3
4,202,314	-		Rv3756c	0.58	+0.1
4,202,363	-		Rv3756c	0.65	+0.1
4,202,516	+		Rv3756c	0.86	-2.7
4,202,586	-				-0.3
4,202,586	-				-0.4
4,202,827	-		Rv3757c	0.31	+0.4
4,202,827	-		Rv3757c	0.31	+0.5