Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3595c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
4,035,897	+				+0.8
4,036,092	+		Rv3594	0.28	+0.2
4,036,337	+		Rv3594	0.58	+0.9
4,036,337	+		Rv3594	0.58	-0.7
4,036,338	-		Rv3594	0.58	+1.0
4,036,539	+		Rv3594	0.82	+0.3
4,036,539	+		Rv3594	0.82	+1.8
4,036,540	-		Rv3594	0.82	+0.5
4,036,540	-		Rv3594	0.82	-0.4
4,036,615	+				-1.4
4,036,616	-				-0.1
4,036,616	-				-0.8
4,036,872	-		Rv3595c	0.11	+0.4
4,036,907	+		Rv3595c	0.13	-0.3
4,036,907	+		Rv3595c	0.13	+0.8
4,036,908	-		Rv3595c	0.13	-0.6
4,037,304	-		Rv3595c	0.43	+0.5
4,037,454	-		Rv3595c	0.55	+0.5
4,037,495	-		Rv3595c	0.58	-1.1
4,037,495	-		Rv3595c	0.58	-1.5
4,037,631	-		Rv3595c	0.68	+0.2
4,037,644	+		Rv3595c	0.69	+0.6
4,037,791	+		Rv3595c	0.80	-0.4
4,037,791	+		Rv3595c	0.80	+1.9
4,037,792	-		Rv3595c	0.80	-0.1
4,037,792	-		Rv3595c	0.80	+0.3
4,037,866	+		Rv3595c	0.86	+0.1
4,038,097	+				-0.6
4,038,097	+				-0.9
4,038,098	-				-2.0
4,038,098	-				-0.8
4,038,134	-				-0.4
4,038,136	+				-0.9
4,038,151	+				-0.2