Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3538

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,976,464	-		Rv3537	0.65	-0.8
3,976,752	+		Rv3537	0.82	+0.8
3,976,762	-		Rv3537	0.82	-1.9
3,976,822	-		Rv3537	0.86	-0.8
3,976,994	-				+0.1
3,977,211	+		Rv3538	0.17	-0.4
3,977,708	-		Rv3538	0.75	-1.5
3,977,991	-				+0.0
3,978,108	-				+0.0
3,978,375	+		Rv3539	0.22	-0.1
3,978,376	-		Rv3539	0.22	-1.0
3,978,479	+		Rv3539	0.29	-1.5
3,978,480	-		Rv3539	0.29	-0.6
3,978,521	+		Rv3539	0.32	+0.1
3,978,522	-		Rv3539	0.32	-1.0
3,978,664	+		Rv3539	0.42	-0.2
3,978,803	+		Rv3539	0.52	-0.7