Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3519

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,954,709	+		Rv3518c	0.32	+0.4
3,954,811	-		Rv3518c	0.41	-0.0
3,955,385	+		Rv3518c	0.89	+2.8
3,955,386	-		Rv3518c	0.89	+0.4
3,955,479	-				+0.1
3,955,537	+				-0.4
3,955,550	-				-0.8
3,955,697	+		Rv3519	0.21	+0.8
3,955,773	-		Rv3519	0.31	+0.7
3,956,054	+		Rv3519	0.71	-1.4
3,956,054	+		Rv3519	0.71	-0.1
3,956,055	-		Rv3519	0.71	+0.8
3,956,159	+		Rv3519	0.86	+1.2
3,956,293	-				-0.5
3,956,515	-		Rv3520c	0.18	+1.2
3,956,515	-		Rv3520c	0.18	-1.0
3,956,515	-		Rv3520c	0.18	-0.1
3,956,608	+		Rv3520c	0.27	+0.6
3,956,608	+		Rv3520c	0.27	-0.1
3,956,609	-		Rv3520c	0.27	+0.1
3,956,752	+		Rv3520c	0.41	+0.5
3,956,752	+		Rv3520c	0.41	+1.0
3,956,753	-		Rv3520c	0.41	-0.2
3,956,753	-		Rv3520c	0.41	+1.4
3,956,857	-		Rv3520c	0.51	+1.0
3,956,938	+		Rv3520c	0.59	-0.7
3,957,001	+		Rv3520c	0.65	+0.3
3,957,044	-		Rv3520c	0.69	-0.4
3,957,177	-		Rv3520c	0.82	+0.5
3,957,177	-		Rv3520c	0.82	+0.7
3,957,177	-		Rv3520c	0.82	-0.1
3,957,177	-		Rv3520c	0.82	-0.2
3,957,226	+		Rv3520c	0.86	+0.8