Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3511

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,938,641	+		Rv3510c	0.26	+0.9
3,938,641	+		Rv3510c	0.26	+1.1
3,938,641	+		Rv3510c	0.26	-0.3
3,938,660	-		Rv3510c	0.29	-0.4
3,938,711	-		Rv3510c	0.35	+1.5
3,938,770	+		Rv3510c	0.42	+0.2
3,938,770	+		Rv3510c	0.42	-0.9
3,938,771	-		Rv3510c	0.42	+0.1
3,938,771	-		Rv3510c	0.42	+0.0
3,938,872	+		Rv3510c	0.54	-0.3
3,938,873	-		Rv3510c	0.54	+0.0
3,938,876	-		Rv3510c	0.54	+0.8
3,938,876	-		Rv3510c	0.54	+0.3
3,938,905	-		Rv3510c	0.58	+0.7
3,939,203	+				+0.4
3,939,291	+				-0.6
3,939,332	+				+0.1
3,939,332	+				-1.7
3,939,333	-				-0.4
3,939,333	-				-0.4
3,939,397	-				-0.4
3,939,397	-				+0.1
3,939,505	+				-1.1
3,939,527	+				+0.4
3,939,527	+				+1.7
3,939,528	-				+0.6
3,939,546	+				-0.1
3,939,590	+				+0.3
3,939,591	-				-0.3
3,939,669	+				+3.2
3,939,669	+				+2.7
3,939,669	+				+0.2
3,939,784	+				+1.4
3,939,785	-				-0.6
3,939,788	+				+1.4
3,939,788	+				+0.0
3,939,788	+				-0.8
3,939,788	+				+0.2
3,939,801	-				+2.2
3,939,875	+		Rv3511	0.12	-0.3
3,939,875	+		Rv3511	0.12	+0.7
3,939,876	-		Rv3511	0.12	-0.0
3,939,876	-		Rv3511	0.12	+0.6
3,939,913	-		Rv3511	0.14	+0.6
3,940,168	-		Rv3511	0.26	+0.1
3,940,168	-		Rv3511	0.26	+0.5
3,940,170	-		Rv3511	0.26	-0.2
3,940,744	-		Rv3511	0.53	+0.0
3,940,970	-		Rv3511	0.63	+1.5
3,942,165	-		Rv3512	0.14	+0.2
3,942,165	-		Rv3512	0.14	-1.3