Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3319

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,705,927	+		Rv3318	0.52	+1.3
3,705,928	-		Rv3318	0.52	-0.4
3,705,928	-		Rv3318	0.52	+0.3
3,705,934	-		Rv3318	0.53	-1.0
3,706,062	+		Rv3318	0.60	-3.0
3,706,208	+		Rv3318	0.68	+1.8
3,706,252	-		Rv3318	0.71	-0.7
3,706,618	-				-0.4
3,706,767	+				-3.5
3,706,770	+				+1.8
3,706,771	-				-2.2
3,706,961	+		Rv3319	0.24	-0.6
3,706,962	-		Rv3319	0.24	+0.3
3,706,962	-		Rv3319	0.24	-0.9
3,706,974	-		Rv3319	0.26	-1.3
3,706,974	-		Rv3319	0.26	-0.6
3,707,195	+		Rv3319	0.53	-1.0
3,707,213	+		Rv3319	0.56	-1.4
3,707,280	-		Rv3319	0.64	-0.2
3,707,354	+		Rv3319	0.73	-0.3
3,707,751	+		Rv3320c	0.25	-0.8
3,708,204	-		Rv3321c	0.53	-1.0
3,708,284	+		Rv3321c	0.86	-0.3
3,708,285	-		Rv3321c	0.87	-0.5
3,708,439	+				-0.8
3,708,439	+				-0.8
3,708,440	-				+0.0
3,708,440	-				+0.3
3,708,440	-				+0.0
3,708,440	-				-2.2
3,708,440	-				+0.8
3,708,440	-				-0.6
3,708,440	-				-1.9
3,708,440	-				-0.7
3,708,501	-		Rv3322c	0.10	+1.2
3,708,516	+		Rv3322c	0.13	-0.5
3,708,516	+		Rv3322c	0.13	-0.0