Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3084

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,449,149	+		Rv3083	0.43	-0.1
3,449,149	+		Rv3083	0.43	+1.8
3,449,266	+		Rv3083	0.51	-0.4
3,449,321	+		Rv3083	0.55	+0.8
3,449,620	+		Rv3083	0.75	-0.3
3,449,620	+		Rv3083	0.75	+0.1
3,449,620	+		Rv3083	0.75	+0.2
3,449,621	-		Rv3083	0.75	-0.2
3,449,621	-		Rv3083	0.75	-0.2
3,449,671	+		Rv3083	0.78	+0.2
3,449,756	-		Rv3083	0.84	+0.3
3,449,830	+		Rv3083	0.89	-0.7
3,450,029	-				-1.8
3,450,029	-				+0.0
3,450,031	+				-1.5
3,450,031	+				-0.5
3,450,319	-		Rv3084	0.35	+1.5
3,450,619	+		Rv3084	0.67	-0.3
3,450,620	-		Rv3084	0.67	+0.2
3,450,620	-		Rv3084	0.67	+2.3
3,450,647	+		Rv3084	0.70	-0.3
3,451,181	+		Rv3085	0.31	-2.2
3,451,203	-		Rv3085	0.34	-0.5
3,451,697	+				+0.0
3,451,697	+				+0.1
3,451,756	+				-0.1
3,451,756	+				-0.6
3,451,881	-				-1.5
3,451,881	-				+0.1
3,451,881	-				-0.2
3,451,881	-				-0.1