Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2740

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,052,828	+		Rv2739c	0.69	+0.1
3,052,828	+		Rv2739c	0.69	+0.1
3,052,829	-		Rv2739c	0.69	+0.7
3,052,829	-		Rv2739c	0.69	-0.8
3,052,866	+		Rv2739c	0.72	+0.7
3,053,220	+				-0.4
3,053,221	-				-0.4
3,053,369	-		Rv2740	0.30	-1.1
3,053,599	+		Rv2740	0.81	+2.7
3,053,599	+		Rv2740	0.81	+0.5
3,053,600	-		Rv2740	0.82	+0.3
3,053,611	+		Rv2740	0.84	+0.5
3,053,611	+		Rv2740	0.84	+0.5
3,053,611	+		Rv2740	0.84	+0.3
3,053,612	-		Rv2740	0.84	+0.5
3,053,612	-		Rv2740	0.84	+0.2
3,053,714	+				-1.1
3,053,715	-				+0.5
3,053,715	-				+0.6
3,053,757	-				+1.0
3,053,763	-				+0.1
3,053,831	-				-2.7
3,053,832	+				+1.6
3,053,833	-				+0.5
3,053,833	-				+0.0
3,054,097	+		Rv2741	0.12	+0.2
3,054,097	+		Rv2741	0.12	-0.1
3,054,097	+		Rv2741	0.12	+0.5
3,054,098	-		Rv2741	0.12	+0.9
3,054,166	+		Rv2741	0.16	-0.3
3,054,172	+		Rv2741	0.16	+1.1
3,054,172	+		Rv2741	0.16	+0.3
3,054,173	-		Rv2741	0.16	-0.1
3,054,173	-		Rv2741	0.16	+0.5
3,054,227	+		Rv2741	0.20	+0.6
3,054,227	+		Rv2741	0.20	+1.2
3,054,228	-		Rv2741	0.20	+0.3
3,054,286	-		Rv2741	0.24	-0.2