Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2724c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,035,308	+		Rv2723	0.33	+1.7
3,035,327	+		Rv2723	0.35	+0.5
3,035,446	+		Rv2723	0.45	+0.0
3,035,446	+		Rv2723	0.45	+1.5
3,035,537	+		Rv2723	0.53	-0.5
3,035,537	+		Rv2723	0.53	+0.3
3,035,541	-		Rv2723	0.53	+3.1
3,035,590	+		Rv2723	0.57	-1.2
3,035,672	+		Rv2723	0.64	+0.3
3,035,677	+		Rv2723	0.64	+0.0
3,035,678	-		Rv2723	0.64	-0.3
3,035,678	-		Rv2723	0.64	-0.7
3,035,678	-		Rv2723	0.64	+0.2
3,035,686	+		Rv2723	0.65	+0.4
3,035,938	+		Rv2723	0.86	-0.3
3,035,938	+		Rv2723	0.86	-0.7
3,036,122	+				+0.2
3,036,187	-				-1.1
3,036,243	+				+0.3
3,036,285	+		Rv2724c	0.13	+0.6
3,036,286	-		Rv2724c	0.13	+0.7
3,036,286	-		Rv2724c	0.13	-0.2
3,036,362	-		Rv2724c	0.20	-3.3
3,036,362	-		Rv2724c	0.20	+0.3
3,036,480	+		Rv2724c	0.30	-0.2
3,036,570	+		Rv2724c	0.38	-0.5
3,036,570	+		Rv2724c	0.38	+0.5
3,036,571	-		Rv2724c	0.38	+0.1
3,036,571	-		Rv2724c	0.38	+1.7
3,036,776	+		Rv2724c	0.56	+0.1
3,036,822	-		Rv2724c	0.60	+0.1
3,036,822	-		Rv2724c	0.60	+0.2
3,036,828	+		Rv2724c	0.60	-2.0
3,036,828	+		Rv2724c	0.60	+1.7
3,036,829	-		Rv2724c	0.60	+0.8
3,036,863	-		Rv2724c	0.63	-1.4
3,036,981	+		Rv2724c	0.73	+0.9
3,036,981	+		Rv2724c	0.73	-0.6
3,036,981	+		Rv2724c	0.73	-1.1
3,037,026	+		Rv2724c	0.77	-0.2
3,037,066	-		Rv2724c	0.81	+2.6
3,037,096	-		Rv2724c	0.83	+0.3
3,037,273	-				+0.0
3,037,523	+				-1.0
3,037,740	-		Rv2725c	0.21	-0.2
3,037,860	-		Rv2725c	0.29	+0.5
3,037,860	-		Rv2725c	0.29	-1.1
3,037,860	-		Rv2725c	0.29	-0.4
3,037,963	+		Rv2725c	0.36	+0.0
3,038,025	-		Rv2725c	0.40	+0.7
3,038,175	-		Rv2725c	0.50	-2.0
3,038,175	-		Rv2725c	0.50	-0.1