Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2716

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,028,224	-		Rv2715	0.12	-0.4
3,028,235	-		Rv2715	0.13	-0.0
3,028,310	-		Rv2715	0.21	-1.6
3,028,348	-		Rv2715	0.24	+0.6
3,028,445	-		Rv2715	0.34	-0.8
3,028,572	-		Rv2715	0.46	-0.2
3,029,117	+				-0.8
3,029,118	-				-0.3
3,029,160	+				-0.6
3,029,160	+				-0.4
3,029,161	-				-0.4
3,029,315	-		Rv2716	0.21	-0.3
3,029,315	-		Rv2716	0.21	-0.7
3,029,367	-		Rv2716	0.28	+0.5
3,029,367	-		Rv2716	0.28	+0.4
3,029,448	-		Rv2716	0.40	+1.7
3,029,448	-		Rv2716	0.40	+0.2
3,029,487	+		Rv2716	0.46	+0.6
3,029,487	+		Rv2716	0.46	+0.3
3,029,616	+		Rv2716	0.65	+0.6
3,029,617	-		Rv2716	0.65	-0.3
3,030,153	+		Rv2717c	0.58	+1.7
3,030,210	+		Rv2717c	0.69	+1.7
3,030,226	+		Rv2717c	0.73	-0.6
3,030,227	-		Rv2717c	0.73	-1.1
3,030,259	-		Rv2717c	0.79	+0.5
3,030,283	-		Rv2717c	0.84	-1.6
3,030,428	+				-0.6
3,030,428	+				-1.1
3,030,512	+		Rv2718c	0.21	-0.9
3,030,512	+		Rv2718c	0.21	+1.2
3,030,512	+		Rv2718c	0.21	-1.0
3,030,513	-		Rv2718c	0.22	-0.2
3,030,513	-		Rv2718c	0.22	-0.8
3,030,517	-		Rv2718c	0.22	-0.5
3,030,735	-		Rv2718c	0.69	-0.5