Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2294

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
2,564,328	+				-0.6
2,564,330	+				-0.2
2,564,330	+				-0.0
2,564,331	-				-0.2
2,564,355	+				-0.7
2,564,356	-				-0.7
2,564,429	+		Rv2293c	0.18	-0.2
2,564,753	+		Rv2293c	0.62	-0.5
2,564,754	-		Rv2293c	0.62	+0.4
2,564,818	+		Rv2293c	0.71	-0.8
2,564,818	+		Rv2293c	0.71	+0.0
2,564,819	-		Rv2293c	0.71	+0.1
2,564,821	+		Rv2293c	0.71	+0.8
2,565,040	+				-0.9
2,565,149	-				-0.3
2,565,262	+				-0.9
2,565,263	-				+0.7
2,565,280	+				+1.0
2,565,310	-				+0.5
2,565,316	-				+0.5
2,565,331	+				+0.0
2,565,332	-				+1.0
2,565,332	-				-0.4
2,565,335	+				+0.6
2,565,480	-		Rv2294	0.12	-0.9
2,565,485	+		Rv2294	0.13	+0.4
2,565,513	+		Rv2294	0.15	+0.4
2,565,513	+		Rv2294	0.15	-0.8
2,565,526	-		Rv2294	0.16	+0.3
2,565,526	-		Rv2294	0.16	-1.3
2,565,683	-		Rv2294	0.29	-0.9
2,565,683	-		Rv2294	0.29	-0.7
2,565,685	-		Rv2294	0.29	-0.9
2,565,697	-		Rv2294	0.30	-0.6
2,565,957	-		Rv2294	0.51	-0.7
2,565,977	+		Rv2294	0.53	-0.7
2,565,977	+		Rv2294	0.53	-0.0
2,566,022	-		Rv2294	0.57	-1.0
2,566,289	+		Rv2294	0.79	-0.6
2,566,289	+		Rv2294	0.79	-0.5
2,566,289	+		Rv2294	0.79	-0.9
2,566,290	-		Rv2294	0.79	+0.7
2,566,293	+		Rv2294	0.79	-1.6
2,566,293	+		Rv2294	0.79	-0.1
2,566,534	+				+0.4
2,566,665	-				-0.2
2,566,687	+				+0.4
2,566,687	+				-0.6
2,566,687	+				-0.3
2,566,688	-				+0.4
2,566,756	-				+0.5
2,566,756	-				+0.3
2,566,979	+		Rv2295	0.32	+0.0
2,566,979	+		Rv2295	0.32	+0.1
2,566,980	-		Rv2295	0.33	-0.1
2,566,980	-		Rv2295	0.33	+0.3
2,566,980	-		Rv2295	0.33	-0.4
2,566,994	+		Rv2295	0.35	-0.1
2,567,011	+		Rv2295	0.37	-0.2
2,567,036	-		Rv2295	0.41	-0.7
2,567,277	-		Rv2295	0.79	-0.1
2,567,277	-		Rv2295	0.79	-0.4
2,567,355	-				+1.7
2,567,393	+				-0.8
2,567,514	+				+2.9
2,567,515	-				-0.3
2,567,515	-				-0.4