Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2284

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
2,555,859	-				-0.4
2,555,927	-				-0.7
2,556,134	-				-0.6
2,556,134	-				-0.5
2,556,232	+				-0.8
2,556,233	-				+0.1
2,556,279	+		Rv2284	0.10	-0.1
2,556,470	+		Rv2284	0.25	+1.7
2,556,470	+		Rv2284	0.25	-0.3
2,556,580	+		Rv2284	0.34	-0.7
2,556,665	+		Rv2284	0.40	-0.1
2,557,034	-		Rv2284	0.69	-0.1
2,557,034	-		Rv2284	0.69	-1.4
2,557,043	-		Rv2284	0.69	-1.1
2,557,142	-		Rv2284	0.77	-1.1
2,557,199	+		Rv2284	0.81	+0.0
2,557,286	+		Rv2284	0.88	-0.9
2,557,287	-		Rv2284	0.88	-0.3
2,557,289	-		Rv2284	0.88	-0.5
2,557,568	+				+2.1
2,557,603	-				+0.9
2,557,603	-				-0.7
2,557,603	-				-1.6
2,557,677	+		Rv2285	0.15	-0.6
2,557,707	+		Rv2285	0.17	-0.0
2,557,707	+		Rv2285	0.17	-0.0
2,557,729	+		Rv2285	0.19	+0.2
2,557,729	+		Rv2285	0.19	+1.7
2,557,860	+		Rv2285	0.29	-1.0
2,557,860	+		Rv2285	0.29	-0.4
2,557,860	+		Rv2285	0.29	+0.4
2,557,861	-		Rv2285	0.29	+1.7
2,558,127	-		Rv2285	0.49	-0.8
2,558,127	-		Rv2285	0.49	-0.5
2,558,272	-		Rv2285	0.60	-0.3