Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2259

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
2,531,503	+		Rv2258c	0.63	+0.5
2,531,581	-		Rv2258c	0.70	-0.4
2,531,717	-		Rv2258c	0.83	-0.3
2,532,225	+				+0.2
2,532,232	+				-1.0
2,532,232	+				+0.4
2,532,233	-				+0.6
2,532,233	-				+0.7
2,532,374	-		Rv2259	0.12	-1.4
2,532,386	+		Rv2259	0.13	+0.7
2,532,413	+		Rv2259	0.15	-0.8
2,532,413	+		Rv2259	0.15	-1.1
2,532,451	-		Rv2259	0.19	-0.5
2,532,472	-		Rv2259	0.21	+0.0
2,533,209	-		Rv2259	0.89	-2.8
2,533,305	+				-0.9
2,533,305	+				-2.7
2,533,306	-				-1.9
2,533,868	+		Rv2260	0.85	-0.4
2,534,011	+				+0.5
2,534,012	-				+0.1
2,534,243	-		Rv2261c	0.48	-0.3