Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2250c
Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5 |
|---|---|---|---|---|---|
| remove | |||||
| 2,523,816 | + | Rv2249c | 0.37 | -0.6 | |
| 2,524,560 | - | Rv2249c | 0.85 | +0.0 | |
| 2,524,663 | + | +1.7 | |||
| 2,524,795 | + | -0.2 | |||
| 2,524,796 | - | -0.6 | |||
| 2,524,796 | - | -0.9 | |||
| 2,524,815 | - | +0.0 | |||
| 2,525,020 | + | Rv2250c | 0.41 | -3.0 | |
| 2,525,103 | + | Rv2250c | 0.56 | -0.5 | |
| 2,525,594 | + | -0.8 | |||
| 2,525,862 | - | Rv2251 | 0.21 | -0.4 | |
| 2,526,250 | - | Rv2251 | 0.48 | -0.7 | |
| 2,526,250 | - | Rv2251 | 0.48 | -0.2 |
Or see this region's nucleotide sequence