Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2191

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
2,452,849	+		Rv2190c	0.63	+0.0
2,452,928	-		Rv2190c	0.70	+1.5
2,452,941	+		Rv2190c	0.71	-2.1
2,452,942	-		Rv2190c	0.71	-2.0
2,452,942	-		Rv2190c	0.71	-1.1
2,452,942	-		Rv2190c	0.71	+1.1
2,452,942	-		Rv2190c	0.71	-1.0
2,453,286	-				-0.4
2,453,384	+				-1.1
2,453,416	-				+0.0
2,453,416	-				-0.3
2,453,424	+				+0.5
2,453,426	+				+0.2
2,453,427	-				-0.5
2,453,647	+				-0.8
2,453,647	+				+0.7
2,453,648	-				-0.5
2,453,686	-				-1.4
2,453,831	-				-0.1
2,454,039	+		Rv2191	0.11	-0.8
2,454,040	-		Rv2191	0.11	-0.2
2,454,079	-		Rv2191	0.13	-0.3
2,454,146	-		Rv2191	0.17	+1.7
2,454,268	+		Rv2191	0.23	+0.7
2,454,343	+		Rv2191	0.27	-0.4
2,454,344	-		Rv2191	0.27	-0.3
2,454,482	+		Rv2191	0.34	-1.3
2,454,482	+		Rv2191	0.34	+0.6
2,454,483	-		Rv2191	0.34	+0.8
2,454,483	-		Rv2191	0.34	+2.5
2,454,500	+		Rv2191	0.35	-1.8
2,454,501	-		Rv2191	0.35	+0.5
2,454,575	+		Rv2191	0.39	-0.1
2,454,575	+		Rv2191	0.39	+1.0
2,454,575	+		Rv2191	0.39	-0.9
2,454,575	+		Rv2191	0.39	+0.4
2,454,575	+		Rv2191	0.39	-0.3
2,454,576	-		Rv2191	0.39	-0.2
2,454,608	+		Rv2191	0.41	+0.5
2,454,608	+		Rv2191	0.41	+0.6
2,454,609	-		Rv2191	0.41	-0.4
2,454,642	+		Rv2191	0.42	-0.0
2,454,650	+		Rv2191	0.43	-0.6
2,454,650	+		Rv2191	0.43	+0.9
2,454,651	-		Rv2191	0.43	-0.6
2,454,651	-		Rv2191	0.43	+1.7
2,454,651	-		Rv2191	0.43	-0.4
2,454,789	-		Rv2191	0.50	+0.5
2,455,172	+		Rv2191	0.70	-0.3
2,455,173	-		Rv2191	0.70	+0.7
2,455,308	-		Rv2191	0.77	-0.6