Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2162c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
2,422,447	-		Rv2161c	0.20	-0.0
2,422,447	-		Rv2161c	0.20	-0.2
2,422,680	+		Rv2161c	0.47	+0.7
2,422,959	+		Rv2161c	0.79	-0.3
2,422,960	-		Rv2161c	0.79	-2.1
2,422,972	-		Rv2161c	0.81	+0.4
2,423,043	+		Rv2161c	0.89	+0.7
2,423,043	+		Rv2161c	0.89	+0.6
2,423,043	+		Rv2161c	0.89	+0.3
2,423,043	+		Rv2161c	0.89	-0.2
2,423,043	+		Rv2161c	0.89	-1.4
2,423,043	+		Rv2161c	0.89	-0.6
2,423,043	+		Rv2161c	0.89	+0.1
2,423,043	+		Rv2161c	0.89	-0.5
2,423,044	-		Rv2161c	0.89	-0.4
2,423,044	-		Rv2161c	0.89	+0.6
2,423,044	-		Rv2161c	0.89	-0.2
2,423,044	-		Rv2161c	0.89	+1.4
2,423,044	-		Rv2161c	0.89	+2.0
2,423,044	-		Rv2161c	0.89	+0.1
2,423,044	-		Rv2161c	0.89	-0.6
2,423,044	-		Rv2161c	0.89	+0.4
2,423,154	+				+0.0
2,423,154	+				+0.7
2,423,155	-				+0.7
2,423,155	-				-0.5
2,423,155	-				-0.3
2,423,155	-				-1.0
2,423,390	-				+0.1
2,423,670	+		Rv2162c	0.27	+0.2
2,423,670	+		Rv2162c	0.27	+0.7
2,423,671	-		Rv2162c	0.27	+0.5
2,424,285	+		Rv2162c	0.65	-1.4
2,424,286	-		Rv2162c	0.65	+0.1
2,424,422	-		Rv2162c	0.74	+1.7
2,424,435	+		Rv2162c	0.75	+0.5
2,424,625	-		Rv2162c	0.87	+0.5
2,424,655	-		Rv2162c	0.88	-0.2
2,424,655	-		Rv2162c	0.88	+0.2
2,424,913	+				-0.0
2,425,050	-				-0.3